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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024603.1-P Field mustard plasma membrane 99.64 99.64
CDY04707 Canola plasma membrane 98.92 98.92
AT1G23480.2 Thale cress plasma membrane 93.15 92.99
CDX70677 Canola cytosol, peroxisome, plasma membrane 56.4 70.65
CDX69464 Canola cytosol, peroxisome, plasma membrane 55.86 69.98
CDX72181 Canola plasma membrane 64.32 68.26
CDY47369 Canola plasma membrane 36.76 68.0
CDY54604 Canola plasma membrane 63.96 67.75
CDX78675 Canola plasma membrane 61.26 67.46
CDY26505 Canola plasma membrane 61.44 66.47
CDX70286 Canola plasma membrane 62.7 65.41
CDY10358 Canola plasma membrane 62.7 65.41
CDY11268 Canola plasma membrane 62.52 65.23
CDY09672 Canola golgi 41.26 65.06
CDY68733 Canola plasma membrane 31.71 64.71
CDY01129 Canola plasma membrane 60.72 62.64
CDY40295 Canola plasma membrane 61.44 62.45
CDX90506 Canola plasma membrane 60.54 60.76
CDY47368 Canola endoplasmic reticulum, extracellular 6.31 60.34
CDY35710 Canola plasma membrane 55.32 60.08
CDY09164 Canola plasma membrane 55.14 60.0
CDX88785 Canola plasma membrane 54.95 59.8
CDX71011 Canola plasma membrane 54.77 59.61
CDY26949 Canola plasma membrane 54.59 59.41
CDY32110 Canola mitochondrion 46.67 58.86
CDX79614 Canola plasma membrane 58.02 58.44
CDY32098 Canola plasma membrane 56.76 58.01
CDX80885 Canola plasma membrane 53.15 56.19
CDY40448 Canola plasma membrane 56.94 53.38
CDX84607 Canola mitochondrion 10.63 49.17
CDY32100 Canola cytosol 1.44 47.06
CDY04011 Canola cytosol, peroxisome, plasma membrane 37.48 45.51
CDY00138 Canola cytosol, peroxisome, plasma membrane 36.94 44.86
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 40.36 39.51
CDY20029 Canola plasma membrane 40.9 34.5
CDX86448 Canola plasma membrane 40.54 34.25
CDX85189 Canola plasma membrane 40.54 34.25
CDX76802 Canola plasma membrane 40.18 33.79
CDY57881 Canola extracellular 7.57 33.6
CDY13445 Canola plasma membrane 40.54 32.75
CDX83148 Canola plasma membrane 40.72 32.66
CDX72314 Canola plasma membrane 40.18 32.6
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 40.0 32.46
CDY08003 Canola cytosol, peroxisome, plasma membrane 40.54 32.37
CDX92340 Canola plasma membrane 54.95 32.28
CDX74051 Canola cytosol, peroxisome, plasma membrane 40.18 31.9
CDX68766 Canola plasma membrane 40.18 28.77
CDX75177 Canola cytosol 14.23 27.15
CDY60854 Canola plasma membrane 40.18 25.49
CDY47235 Canola plasma membrane 10.99 18.71
Protein Annotations
EnsemblPlants:CDY44151EnsemblPlantsGene:GSBRNA2T00079612001Gene3D:3.90.550.10GO:A0A078I2V8GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF21PFAM:PF13641
ProteinID:CDY44151ProteinID:CDY44151.1SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EEDEB2UniProt:A0A078I2V8
MapMan:21.2.3.1.1.1:::::
Description
BnaA09g31010DBnaA09g31010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2V8]
Coordinates
chrLK032580:+:191411..194701
Molecular Weight (calculated)
64264.0 Da
IEP (calculated)
8.648
GRAVY (calculated)
0.210
Length
555 amino acids
Sequence
(BLAST)
001: MSPFMKFFNF LYDSLPPSTW FLVQRHNLAS SSETDEVVRS GIIGELIYIW KETRIFVFIP ILKFLVTMCL VMSFLLFIER VYMSVVVVIV KLLRRTPEKV
101: HKWEAINDDD LELAHTNYPM VLIQIPMYNE KEVCQLSIGA ACRLSWPLDR MIVQVLDDST DPASKELVNA ECDKWARKGI NIMSEIRDNR IGYKAGALKA
201: GMMHNYVKQC EFVAIFDADF QPDPDFLART IPFLIHNREI SLVQCRWKFV NANECLMTRM QEMSLNYHFL AEQESGSSIH AFFGFNGTAG VWRIAALNEA
301: GGWKDRTTVE DMDLAVRACL HGWKFVYVHN VEVKNELPST FKAYRFQQHR WSCGPANLWR KMTMEILQNK KVSAWKKLYL IYNFFFIRKI VVHIFTFVFY
401: CLILPATVLF PELQVPKWAT VYVPSTITLL NALATPRSLH LLVFWILFEN VMSMHRTKAT FIGLLEAGRV NEWVVTEKLG DTLKSKLIAK ATTKLYTRFG
501: QRINWRELVV GLYIFICGCY DFAYGGSYFY VYLFLQACAF FVAGVGYIGT IVPIG
Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.