CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69464	Canola	cytosol, peroxisome, plasma membrane	92.55	92.55
CDX78675	Canola	plasma membrane	97.74	85.91
CDY47369	Canola	plasma membrane	56.21	83.0
CDY68733	Canola	plasma membrane	49.44	80.51
CDY26505	Canola	plasma membrane	92.55	79.92
AT5G16190.4	Thale cress	plasma membrane	88.94	73.37
CDY01129	Canola	plasma membrane	81.26	66.91
CDY40295	Canola	plasma membrane	80.59	65.38
CDY09672	Canola	golgi	46.95	59.09
CDY47368	Canola	endoplasmic reticulum, extracellular	7.67	58.62
CDX90506	Canola	plasma membrane	73.14	58.59
CDY44151	Canola	plasma membrane	70.65	56.4
CDY04707	Canola	plasma membrane	70.43	56.22
CDY11268	Canola	plasma membrane	66.82	55.64
CDX70286	Canola	plasma membrane	66.59	55.45
CDY10358	Canola	plasma membrane	66.59	55.45
CDY32110	Canola	mitochondrion	54.85	55.23
CDX72181	Canola	plasma membrane	64.79	54.88
CDY54604	Canola	plasma membrane	64.11	54.2
CDY35710	Canola	plasma membrane	58.69	50.88
CDX88785	Canola	plasma membrane	58.47	50.78
CDY09164	Canola	plasma membrane	58.47	50.78
CDX71011	Canola	plasma membrane	58.47	50.78
CDY26949	Canola	plasma membrane	58.24	50.59
CDY32098	Canola	plasma membrane	61.63	50.28
CDX80885	Canola	plasma membrane	57.11	48.19
CDX79614	Canola	plasma membrane	59.82	48.09
CDY40448	Canola	plasma membrane	62.08	46.45
CDX84607	Canola	mitochondrion	11.74	43.33
CDY04011	Canola	cytosol, peroxisome, plasma membrane	44.7	43.33
CDY00138	Canola	cytosol, peroxisome, plasma membrane	44.02	42.67
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	45.15	35.27
CDY57881	Canola	extracellular	8.8	31.2
CDX85189	Canola	plasma membrane	45.15	30.44
CDX86448	Canola	plasma membrane	45.15	30.44
CDY20029	Canola	plasma membrane	44.92	30.24
CDX76802	Canola	plasma membrane	44.47	29.85
CDX72314	Canola	plasma membrane	45.37	29.39
CDY13445	Canola	plasma membrane	44.92	28.97
CDX83148	Canola	plasma membrane	45.15	28.9
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	44.47	28.8
CDX92340	Canola	plasma membrane	58.69	27.51
CDY08003	Canola	cytosol, peroxisome, plasma membrane	43.12	27.48
CDX74051	Canola	cytosol, peroxisome, plasma membrane	43.12	27.32
CDX68766	Canola	plasma membrane	45.15	25.81
CDX75177	Canola	cytosol	16.93	25.77
CDY32100	Canola	cytosol	0.9	23.53
CDY60854	Canola	plasma membrane	45.15	22.86
CDY47235	Canola	plasma membrane	12.64	17.18

Protein Annotations

EnsemblPlants:CDX70677	EnsemblPlantsGene:GSBRNA2T00140536001	Gene3D:3.90.550.10	GO:A0A078C1S5	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641	ProteinID:CDX70677	ProteinID:CDX70677.1	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI0004EDE3C9	MapMan:21.2.3.1.1.1	:	:	:

Description

BnaC03g07610D

Coordinates

chrLK031791:-:1500003..1504883

Molecular Weight (calculated)

51505.3 Da

IEP (calculated)

8.691

GRAVY (calculated)

0.134

Length

443 amino acids

Sequence
(BLAST)

001: MQEDIEVGNQ NYPMVLVQIP MYNEREVFQL SIGAACRLTW PLDRVIIQVL DDSTNPTIME MVSVECAKWA SKGINIKCER RDNRNGYKAG ALKQGMRHSY
101: VKQCNYIAIF DADFQPEPDY LHRTVPFLIH NPELALVQAR WKFVNANKCL MTRMQEMSLN YHFMAEQESG STRHAFFGFN GTAGVWRLAG MEEAGGWKDR
201: TTVEDMDLAV RVGLHGWKFV FVNDIEVKSE LPSQFKAFRF QQHRWSCGPA NLFRKMTMEI IHNKRVMIWK KLYVIYSFFF LRKILVHFFT FFFYCIILPT
301: SVFFYEVSIP TWSTIYVPFM ITFFTAIATP RSFYLVFFWV LFENVMAMHR TKGTFIGLLE GGRVNEWVVT EKLGDALQTK LLPQVKKPLN GILQRLNLKE
401: MMVGIYILCC ACYDFAFGSS LLYIYLFMQA LAFIICGVGF VGT

Best Arabidopsis Sequence Match ( AT5G16190.1 )
(BLAST)

001: MQEDLELGNQ NFPMVLVQIP MYNEREVFKL SIGAACRLIW PLDRLIVQVL DDSTDPTIME MVSTECGKWA TKGINIKCER RDNRNGYKAG ALKQGMRHSY
101: VKTCTYIAIF DADFQPEPDY LERTVPFLIH NPELALVQAR WKFVNAKKCL MTRMQEMSLN YHFTAEQESG STRHAFFGFN GTAGVWRLAA MEEAGGWKDR
201: TTVEDMDLAV RVGLHGWKFV FVNDVSVKSE LPSQFKAFRF QQHRWSCGPA NLFRKMTMEI IRNKRVTIWK KLYVIYSFFF VRKIIVHFFT FFFYCFILPT
301: SVFFPEVNIP TWSTVYFPFM ITLFNAIATP RSFYLVIFWV LFENVMAMHR TKGTFIGLLE GGRVNEWVVT EKLGDALETK LLPQVRKPRN GFLERINSKE
401: MMVGIYILCC ASYNLVFGKT VLYIYLYMQA LAFIIAGIGF IGT

Arabidopsis Description

ATCSLA11cellulose synthase like A11 [Source:TAIR;Acc:AT5G16190]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.