Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32110 | Canola | mitochondrion | 77.5 | 21.14 |
| CDX79614 | Canola | plasma membrane | 94.17 | 20.51 |
| Bra023020.1-P | Field mustard | plasma membrane | 93.33 | 20.44 |
| CDY68733 | Canola | plasma membrane | 41.67 | 18.38 |
| AT2G35650.1 | Thale cress | plasma membrane | 75.83 | 16.37 |
| CDY32098 | Canola | plasma membrane | 73.33 | 16.21 |
| CDY40448 | Canola | plasma membrane | 74.17 | 15.03 |
| CDX69464 | Canola | cytosol, peroxisome, plasma membrane | 45.0 | 12.19 |
| CDX70677 | Canola | cytosol, peroxisome, plasma membrane | 43.33 | 11.74 |
| CDY11268 | Canola | plasma membrane | 50.0 | 11.28 |
| CDX70286 | Canola | plasma membrane | 50.0 | 11.28 |
| CDY10358 | Canola | plasma membrane | 50.0 | 11.28 |
| CDX80885 | Canola | plasma membrane | 49.17 | 11.24 |
| CDY47235 | Canola | plasma membrane | 29.17 | 10.74 |
| CDY44151 | Canola | plasma membrane | 49.17 | 10.63 |
| CDY04707 | Canola | plasma membrane | 49.17 | 10.63 |
| CDY26505 | Canola | plasma membrane | 44.17 | 10.33 |
| CDX78675 | Canola | plasma membrane | 43.33 | 10.32 |
| CDX90506 | Canola | plasma membrane | 43.33 | 9.4 |
| CDX72181 | Canola | plasma membrane | 40.83 | 9.37 |
| CDY54604 | Canola | plasma membrane | 40.83 | 9.35 |
| CDY40295 | Canola | plasma membrane | 42.5 | 9.34 |
| CDY47369 | Canola | plasma membrane | 23.33 | 9.33 |
| CDY01129 | Canola | plasma membrane | 40.83 | 9.11 |
| CDY57881 | Canola | extracellular | 9.17 | 8.8 |
| CDY04011 | Canola | cytosol, peroxisome, plasma membrane | 30.0 | 7.88 |
| CDY35710 | Canola | plasma membrane | 33.33 | 7.83 |
| CDY00138 | Canola | cytosol, peroxisome, plasma membrane | 29.17 | 7.66 |
| CDX71011 | Canola | plasma membrane | 31.67 | 7.45 |
| CDY26949 | Canola | plasma membrane | 31.67 | 7.45 |
| CDX88785 | Canola | plasma membrane | 31.67 | 7.45 |
| CDY09164 | Canola | plasma membrane | 31.67 | 7.45 |
| CDY34018 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 29.17 | 6.17 |
| CDY32100 | Canola | cytosol | 0.83 | 5.88 |
| CDX86448 | Canola | plasma membrane | 30.0 | 5.48 |
| CDX85189 | Canola | plasma membrane | 30.0 | 5.48 |
| CDY20029 | Canola | plasma membrane | 30.0 | 5.47 |
| CDY08003 | Canola | cytosol, peroxisome, plasma membrane | 30.0 | 5.18 |
| CDX83148 | Canola | plasma membrane | 29.17 | 5.06 |
| CDX74051 | Canola | cytosol, peroxisome, plasma membrane | 29.17 | 5.01 |
| CDX76802 | Canola | plasma membrane | 27.5 | 5.0 |
| CDX72314 | Canola | plasma membrane | 28.33 | 4.97 |
| CDY34762 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 27.5 | 4.82 |
| CDY13445 | Canola | plasma membrane | 27.5 | 4.8 |
| CDX68766 | Canola | plasma membrane | 26.67 | 4.13 |
| CDX75177 | Canola | cytosol | 10.0 | 4.12 |
| CDX92340 | Canola | plasma membrane | 31.67 | 4.02 |
| CDY60854 | Canola | plasma membrane | 26.67 | 3.66 |
| CDY47368 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| CDY09672 | Canola | golgi | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX84607 | EnsemblPlantsGene:GSBRNA2T00141871001 | GO:A0A078D627 | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF21 | ProteinID:CDX84607 |
| ProteinID:CDX84607.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE7F0C | MapMan:35.1 | : |
Description
BnaA03g16230D
Coordinates
chrLK031838:-:298979..304386
Molecular Weight (calculated)
13620.9 Da
IEP (calculated)
9.061
GRAVY (calculated)
0.458
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVLTSFRSY LNAMSLVRTK ALVMGLFETG RVQEWVVTEK LGDGLKTKLI AQAPGEEHHV RFRDRVHLME LLVGVYLLFC GCYDIIYGKQ TLFLYLLFQS
101: MGFFVVGFGY VGKYVAASSS
101: MGFFVVGFGY VGKYVAASSS
001: MIPRIQPELV KKECDRWSKE GVNITFEIRD NRNGYKAGAL REGMRHSYVK QCDYVAIFDA DFQPDPDFLH RTVPFLIHNP KLALVQGRWE FVNAGQCMMT
101: RLQEMSLSYH FTIEQQVGSS TFAFFGFNGT AGVWRISALN ESGGWNDQTT VEDMDLAVRA TLRGWKFLYI DDLKVKSELP CSFKALRSQQ HRWTCGPANL
201: LRKMAGQIIR SENVSLWKKW YMLYSFFFMR KIVAHILTFC FYCVILPATV LFPEVTVPKW AAFYLPSLIT LLIAIGRLRS IHLLAFWVLF ENAMSLLRAK
301: ALVMGLFETG RVQEWVVTEK LGDTLKTKLI PQVPNVRFRE RVHLLELLVG AYLLFCGIYD IVYGKNTLYV YLLFQSVAFF VVGFGFVGKY VPASSYLA
101: RLQEMSLSYH FTIEQQVGSS TFAFFGFNGT AGVWRISALN ESGGWNDQTT VEDMDLAVRA TLRGWKFLYI DDLKVKSELP CSFKALRSQQ HRWTCGPANL
201: LRKMAGQIIR SENVSLWKKW YMLYSFFFMR KIVAHILTFC FYCVILPATV LFPEVTVPKW AAFYLPSLIT LLIAIGRLRS IHLLAFWVLF ENAMSLLRAK
301: ALVMGLFETG RVQEWVVTEK LGDTLKTKLI PQVPNVRFRE RVHLLELLVG AYLLFCGIYD IVYGKNTLYV YLLFQSVAFF VVGFGFVGKY VPASSYLA
Arabidopsis Description
CSLA7Probable mannan synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQN8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.