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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32098 Canola plasma membrane 89.7 97.79
CDY32110 Canola mitochondrion 66.05 88.86
Bra017305.1-P Field mustard plasma membrane 94.43 87.07
CDX79614 Canola plasma membrane 80.24 86.21
AT2G35650.1 Thale cress plasma membrane 79.56 84.71
CDX84607 Canola mitochondrion 15.03 74.17
CDY10358 Canola plasma membrane 57.6 64.1
CDX70286 Canola plasma membrane 57.43 63.91
CDY11268 Canola plasma membrane 57.09 63.53
CDX69464 Canola cytosol, peroxisome, plasma membrane 47.47 63.43
CDY47369 Canola plasma membrane 31.59 62.33
CDX78675 Canola plasma membrane 52.87 62.1
CDX70677 Canola cytosol, peroxisome, plasma membrane 46.45 62.08
CDY26505 Canola plasma membrane 53.21 61.4
CDY68733 Canola plasma membrane 27.7 60.29
CDY09672 Canola golgi 34.97 58.81
CDY54604 Canola plasma membrane 51.86 58.59
CDX72181 Canola plasma membrane 51.69 58.51
CDY40295 Canola plasma membrane 53.38 57.88
CDY35710 Canola plasma membrane 49.32 57.14
CDY44151 Canola plasma membrane 53.38 56.94
CDY01129 Canola plasma membrane 51.69 56.88
CDY09164 Canola plasma membrane 48.99 56.86
CDX88785 Canola plasma membrane 48.82 56.67
CDY04707 Canola plasma membrane 53.04 56.58
CDY26949 Canola plasma membrane 48.65 56.47
CDX71011 Canola plasma membrane 48.48 56.27
CDX80885 Canola plasma membrane 48.48 54.67
CDX90506 Canola plasma membrane 49.83 53.35
CDY04011 Canola cytosol, peroxisome, plasma membrane 34.63 44.86
CDY00138 Canola cytosol, peroxisome, plasma membrane 34.46 44.64
CDY47368 Canola endoplasmic reticulum, extracellular 4.22 43.1
CDY32100 Canola cytosol 1.18 41.18
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 36.49 38.1
CDY57881 Canola extracellular 7.6 36.0
CDY20029 Canola plasma membrane 37.84 34.04
CDX76802 Canola plasma membrane 37.84 33.94
CDX86448 Canola plasma membrane 37.5 33.79
CDX85189 Canola plasma membrane 37.5 33.79
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 37.67 32.6
CDX72314 Canola plasma membrane 37.33 32.31
CDY13445 Canola plasma membrane 37.16 32.02
CDY08003 Canola cytosol, peroxisome, plasma membrane 36.82 31.37
CDX83148 Canola plasma membrane 36.66 31.36
CDX74051 Canola cytosol, peroxisome, plasma membrane 36.82 31.19
CDX92340 Canola plasma membrane 48.65 30.48
CDX68766 Canola plasma membrane 37.84 28.9
CDY60854 Canola plasma membrane 37.67 25.49
CDX75177 Canola cytosol 11.49 23.37
CDY47235 Canola plasma membrane 9.97 18.1
Protein Annotations
EnsemblPlants:CDY40448EnsemblPlantsGene:GSBRNA2T00069667001Gene3D:3.90.550.10GO:A0A078HUJ9GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF21PFAM:PF13641
ProteinID:CDY40448ProteinID:CDY40448.1SEG:segSUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EDC7FD
UniProt:A0A078HUJ9MapMan:21.2.3.1.1.1::::
Description
BnaA04g20690DBnaA04g20690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUJ9]
Coordinates
chrLK032470:-:215541..218304
Molecular Weight (calculated)
68310.2 Da
IEP (calculated)
8.043
GRAVY (calculated)
0.045
Length
592 amino acids
Sequence
(BLAST)
001: MKLELVHLAD ENSQLTLKTR ENDRDRDRDR DRETEASCHL LGAGQRDCSM SPLTSFHRIA HDTFSSFLLS LDGSFLLGSE DVVNTRISLW WEQARAIVVV
101: PFFKFLVALC LIMSVMYFVE VMYMGIVVAY VKLFKRKPEK VYKWEAMEND AECGSKSFPM VLVQIPMYNE KEVCEQSIAA ACKISWPSNR IIIQVLDDST
201: DPASKELVRR ECERWSREGV NITFEIRDNR NGYKAGALRE GMKHSYVKQC DYIAIFDADF QPEPDFLHRT VPFLIHNPKL ALVQGRWEFV NADQCMMTRL
301: QEMSLSYHFT VEQQVGSSTF AFFGFNGTAG VWRISALNES GGWNDQTTVE DMDVAVRATL RGWKLLYIDD LKVKSELPCS FNALRSQQHR WTCGPANLFR
401: KMAGQIIRSE NVSLWKKLYM LYSFFFMRKV VAHILTFCFY CVILPATVLF PEVTVPKWAA FYLPALITLF IAIGKPRSVY LLAFWVLFEN AMSMLRTKAL
501: VMGLFETGRV QEWVVTEKLG DGLKTKLIGQ VPNEHQVRFR DRVHFLELFL GVYLLFCGCY DIIYGKNKLY LYVYLLMQSA AFFVVGFGFV GK
Best Arabidopsis Sequence Match ( AT2G35650.1 )
(BLAST)
001: MSPLPIFHRL PHATFSSFLL SLSQAGSSKT SVAFLNAFKS EDIIARIGLW WQLIRAVVVV PVFKFLVLLC LVMSVMFFVE VMYMGIVVLY VKLFKRKPEK
101: FYKWEAMEDD VECGSASYPM VLVQIPMYNE KEVCEQSIAA ACKISWPSNR IIIQVLDDST DPASKELVKK ECDRWSKEGV NITFEIRDNR NGYKAGALRE
201: GMRHSYVKQC DYVAIFDADF QPDPDFLHRT VPFLIHNPKL ALVQGRWEFV NAGQCMMTRL QEMSLSYHFT IEQQVGSSTF AFFGFNGTAG VWRISALNES
301: GGWNDQTTVE DMDLAVRATL RGWKFLYIDD LKVKSELPCS FKALRSQQHR WTCGPANLLR KMAGQIIRSE NVSLWKKWYM LYSFFFMRKI VAHILTFCFY
401: CVILPATVLF PEVTVPKWAA FYLPSLITLL IAIGRLRSIH LLAFWVLFEN AMSLLRAKAL VMGLFETGRV QEWVVTEKLG DTLKTKLIPQ VPNVRFRERV
501: HLLELLVGAY LLFCGIYDIV YGKNTLYVYL LFQSVAFFVV GFGFVGKYVP ASSYLA
Arabidopsis Description
CSLA7Probable mannan synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQN8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.