Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012702.1-P Field mustard plasma membrane 94.89 66.14
CDX90506 Canola plasma membrane 94.89 60.4
AT4G16590.1 Thale cress endoplasmic reticulum, plasma membrane 78.12 52.88
CDX78675 Canola plasma membrane 69.6 48.61
CDY26505 Canola plasma membrane 69.6 47.76
CDX70677 Canola cytosol, peroxisome, plasma membrane 59.09 46.95
CDX69464 Canola cytosol, peroxisome, plasma membrane 58.81 46.73
CDY47369 Canola plasma membrane 39.77 46.67
CDY47368 Canola endoplasmic reticulum, extracellular 7.67 46.55
CDY40295 Canola plasma membrane 67.9 43.77
CDY01129 Canola plasma membrane 65.34 42.75
CDY26949 Canola plasma membrane 60.23 41.57
CDX88785 Canola plasma membrane 60.23 41.57
CDY09164 Canola plasma membrane 60.23 41.57
CDY11268 Canola plasma membrane 62.78 41.54
CDX71011 Canola plasma membrane 59.94 41.37
CDY10358 Canola plasma membrane 62.5 41.35
CDY35710 Canola plasma membrane 59.94 41.29
CDY44151 Canola plasma membrane 65.06 41.26
CDX70286 Canola plasma membrane 62.22 41.17
CDY04707 Canola plasma membrane 64.49 40.9
CDX72181 Canola plasma membrane 57.67 38.81
CDY54604 Canola plasma membrane 57.67 38.74
CDX79614 Canola plasma membrane 59.94 38.29
CDY32098 Canola plasma membrane 58.52 37.94
CDY32100 Canola cytosol 1.7 35.29
CDY40448 Canola plasma membrane 58.81 34.97
CDY32110 Canola mitochondrion 42.05 33.64
CDX80885 Canola plasma membrane 49.43 33.14
CDY68733 Canola plasma membrane 25.57 33.09
CDY04011 Canola cytosol, peroxisome, plasma membrane 40.06 30.85
CDY00138 Canola cytosol, peroxisome, plasma membrane 39.49 30.42
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 46.31 28.75
CDX76802 Canola plasma membrane 45.45 24.24
CDY20029 Canola plasma membrane 44.89 24.01
CDX85189 Canola plasma membrane 44.32 23.74
CDX86448 Canola plasma membrane 44.32 23.74
CDX83148 Canola plasma membrane 46.02 23.41
CDX72314 Canola plasma membrane 45.17 23.25
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 44.89 23.1
CDY13445 Canola plasma membrane 44.6 22.85
CDY08003 Canola cytosol, peroxisome, plasma membrane 44.89 22.73
CDX74051 Canola cytosol, peroxisome, plasma membrane 44.89 22.6
CDX92340 Canola plasma membrane 60.51 22.54
CDY57881 Canola extracellular 7.67 21.6
CDX68766 Canola plasma membrane 45.17 20.52
CDY60854 Canola plasma membrane 45.17 18.17
CDX75177 Canola cytosol 13.35 16.15
CDY47235 Canola plasma membrane 1.7 1.84
CDX84607 Canola mitochondrion 0.0 0.0
Protein Annotations
EnsemblPlants:CDY09672EnsemblPlantsGene:GSBRNA2T00031339001Gene3D:3.90.550.10GO:A0A078F9D2GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF21PFAM:PF13641
ProteinID:CDY09672ProteinID:CDY09672.1SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EE37B7UniProt:A0A078F9D2
MapMan:21.2.3.1.1.1:::::
Description
BnaC07g33890DBnaC07g33890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9D2]
Coordinates
chrLK031998:-:403564..406687
Molecular Weight (calculated)
41028.9 Da
IEP (calculated)
8.790
GRAVY (calculated)
-0.066
Length
352 amino acids
Sequence
(BLAST)
001: MQIQYLWRKT RSLVLLPVFK GLVIMCLVLS IIVFFESFYM NIVIFFGKLL RRKPEKLYKW EAMQEDVEAG SENYPKVLVQ IPMYNEKEVF QISIAAVCSL
101: LWPSSRLVIQ VVDDSTDPVV REGVDIEIAK WQSQGINIRC ERRDNRNGYK AGAMKEALTH NYVKQCDFVA VFDADFQPDP DYLARTIPFL VHNPDVALVQ
201: ARWIFVNANK CLMTRMQEMS LNYHFKVEQE SGFTRHAFFG FNGTAGVWRI SAMDAAGGWK SRTTVEDMDL AVRVGLHGWK FVYLNDLTVR NELPSKFKAY
301: RFQQHRWSCG PANLFRKMTM EIIYNKVFFC HYASFDPHLT VTDWSRFIPS LV
Best Arabidopsis Sequence Match ( AT4G13410.2 )
(BLAST)
001: MFLLLKPLLS LHDLSLNLLS VMFHGETLKA SVDGVGINMS TMWRETRNVF IVPLFKCIVV MCLIISLLVF VESVYMNLVV LYVKLFNRKP EKVYKWEAMQ
101: EDMELGHQNY PMVLVQIPMY NEREVFELSI GAACRLTWPS DRLIVQVLDD STDPAIMELV SMECTKWASK DININYERRE NRNGYKAGAL KHGMRHSYVK
201: QCQYLAIFDA DFQPEPDYLQ RAIPFLIHNP EVALVQARWR FVNANTCLMT RMQEMSLNYH FMAEQQSGST RHAFFGFNGT AGVWRMVAME EAGGWKDRTT
301: VEDMDLAVRV GLLGWKFIFV NDLEVKSELP SQFKAFRFQQ HRWSCGPANL IRKMTMEIIH NKVFLPFTIF HFQTHISHVP TTFLFGSSLA TILRGASF
Arabidopsis Description
CSLA15Probable mannan synthase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0L2]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.