Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31590.1 | CDX70995 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDX88803 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDX92368 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDY09128 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04011 | Canola | cytosol, peroxisome, plasma membrane | 64.0 | 17.51 |
| CDY00138 | Canola | cytosol, peroxisome, plasma membrane | 64.0 | 17.51 |
| Os08t0253800-01 | Rice | cytosol, peroxisome, plasma membrane | 63.2 | 16.49 |
| CDY47369 | Canola | plasma membrane | 34.4 | 14.33 |
| CDX72314 | Canola | plasma membrane | 77.6 | 14.18 |
| AT4G31590.1 | Thale cress | plasma membrane | 77.6 | 14.02 |
| CDY13445 | Canola | plasma membrane | 76.8 | 13.97 |
| CDY34018 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 63.2 | 13.93 |
| CDX76802 | Canola | plasma membrane | 70.4 | 13.33 |
| CDX68766 | Canola | plasma membrane | 80.0 | 12.9 |
| CDY34762 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 70.4 | 12.87 |
| KRH61950 | Soybean | plasma membrane | 71.2 | 12.84 |
| VIT_04s0069g00780.t01 | Wine grape | plasma membrane | 71.2 | 12.82 |
| KRH52609 | Soybean | plasma membrane | 70.4 | 12.7 |
| KRH16165 | Soybean | plasma membrane | 69.6 | 12.55 |
| VIT_09s0018g01950.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 69.6 | 12.55 |
| PGSC0003DMT400024646 | Potato | golgi, peroxisome, plasma membrane | 69.6 | 12.54 |
| CDX85189 | Canola | plasma membrane | 65.6 | 12.48 |
| CDX86448 | Canola | plasma membrane | 65.6 | 12.48 |
| Solyc08g006310.2.1 | Tomato | golgi, peroxisome, plasma membrane | 68.8 | 12.39 |
| KRH04930 | Soybean | plasma membrane | 68.0 | 12.27 |
| CDY20029 | Canola | plasma membrane | 64.0 | 12.16 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 62.4 | 12.07 |
| CDY60854 | Canola | plasma membrane | 80.0 | 11.43 |
| CDX83148 | Canola | plasma membrane | 63.2 | 11.42 |
| CDY08003 | Canola | cytosol, peroxisome, plasma membrane | 62.4 | 11.22 |
| CDX74051 | Canola | cytosol, peroxisome, plasma membrane | 61.6 | 11.02 |
| CDY68733 | Canola | plasma membrane | 23.2 | 10.66 |
| KXG24822 | Sorghum | peroxisome | 64.0 | 10.53 |
| Zm00001d024178_P002 | Maize | cytosol, peroxisome, plasma membrane | 63.2 | 10.44 |
| Zm00001d049336_P001 | Maize | plasma membrane | 63.2 | 10.34 |
| TraesCSU01G038900.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.6 | 10.27 |
| TraesCS3B01G000600.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.6 | 10.25 |
| CDY32110 | Canola | mitochondrion | 36.0 | 10.23 |
| TraesCS3D01G010500.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.6 | 10.16 |
| CDY47235 | Canola | plasma membrane | 26.4 | 10.12 |
| CDX84607 | Canola | mitochondrion | 8.8 | 9.17 |
| CDX69464 | Canola | cytosol, peroxisome, plasma membrane | 32.0 | 9.03 |
| CDX70677 | Canola | cytosol, peroxisome, plasma membrane | 31.2 | 8.8 |
| CDY11268 | Canola | plasma membrane | 35.2 | 8.27 |
| CDY10358 | Canola | plasma membrane | 35.2 | 8.27 |
| CDX70286 | Canola | plasma membrane | 35.2 | 8.27 |
| CDY09164 | Canola | plasma membrane | 33.6 | 8.24 |
| CDY32098 | Canola | plasma membrane | 35.2 | 8.1 |
| CDX71011 | Canola | plasma membrane | 32.8 | 8.04 |
| CDY26949 | Canola | plasma membrane | 32.8 | 8.04 |
| CDX88785 | Canola | plasma membrane | 32.8 | 8.04 |
| CDY35710 | Canola | plasma membrane | 32.8 | 8.02 |
| CDY01129 | Canola | plasma membrane | 34.4 | 7.99 |
| CDY26505 | Canola | plasma membrane | 32.8 | 7.99 |
| CDX79614 | Canola | plasma membrane | 34.4 | 7.8 |
| CDX78675 | Canola | plasma membrane | 31.2 | 7.74 |
| CDY09672 | Canola | golgi | 21.6 | 7.67 |
| CDY40448 | Canola | plasma membrane | 36.0 | 7.6 |
| CDY04707 | Canola | plasma membrane | 33.6 | 7.57 |
| CDY44151 | Canola | plasma membrane | 33.6 | 7.57 |
| CDY40295 | Canola | plasma membrane | 32.0 | 7.33 |
| CDX72181 | Canola | plasma membrane | 30.4 | 7.27 |
| CDY54604 | Canola | plasma membrane | 30.4 | 7.25 |
| CDX90506 | Canola | plasma membrane | 31.2 | 7.05 |
| CDX75177 | Canola | cytosol | 14.4 | 6.19 |
| CDY32100 | Canola | cytosol | 0.8 | 5.88 |
| CDX92340 | Canola | plasma membrane | 33.6 | 4.44 |
| CDX80885 | Canola | plasma membrane | 16.8 | 4.0 |
| CDY47368 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| KRH57821 | Soybean | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY57881 | EnsemblPlantsGene:GSBRNA2T00022785001 | GO:A0A078J2U8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR32044 | PANTHER:PTHR32044:SF7 | ProteinID:CDY57881 | ProteinID:CDY57881.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EAF368 | UniProt:A0A078J2U8 | MapMan:35.1 | : | : | : |
Description
BnaC03g77260DBnaC03g77260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2U8]
Coordinates
chrLK033613:-:35423..35921
Molecular Weight (calculated)
14362.4 Da
IEP (calculated)
9.809
GRAVY (calculated)
-0.002
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLTRPQNIN LCFHFEVEQQ VSGVFLNFFG FNGTAGVWRI KALEESGGWL ERYGYSSPRA SPWMELSQLE EQKQVVAKKP VKKINKVYHK ELALAVRSLL
101: AAQGVHFYFL LFQGVSPFFS WVLTS
101: AAQGVHFYFL LFQGVSPFFS WVLTS
001: MAPNSVAVTM EKPDNFSLLE INGSDPSSFP DKRKSISPKQ FSWFLLLKAH RLISCLSWLV SSVKKRIAFS AKNINEEEDP KSRGKQMYRF IKACLVISII
101: ALSIEIVAHF KKWNLDLINR PSWEVYGLVE WSYMAWLSFR SDYIAPLVIS LSRFCTVLFL IQSLDRLVLC LGCFWIKFKK IEPKLTEESI DLEDPSSFPM
201: VLIQIPMCNE REVYEQSIGA ASQLDWPKDR ILIQVLDDSD DPNLQLLIKE EVSVWAEKGV NIIYRHRLIR TGYKAGNLKS AMTCDYVKDY EFVTIFDADF
301: TPNPDFLKKT VPHFKGNPEL GLVQARWSFV NKDENLLTRL QNINLCFHFE VEQQVNGVFL NFFGFNGTAG VWRIKALEES GGWLERTTVE DMDIAVRAHL
401: NGWKFIYLND VEVTCELPES YEAYKKQQHR WHSGPMQLFR LCLPSIIKSK ISVWKKANLI FLFFLLRKLI LPFYSFTLFC IILPLTMFIP EAELPLWIIC
501: YVPIFISLLN ILPSPKSFPF LVPYLLFENT MSITKFNAMI SGLFQFGSAY EWVVTKKTGR SSESDLLAFA EKEEKLHRRN SESGLELLSK LKEQETNLVG
601: QETVKKSLGG LMRPKNKKKT NMVFKKELGL AFLLLTAAAR SFLSAHGLHF YFLLFQGLSF LVVGLDLIGE QIS
101: ALSIEIVAHF KKWNLDLINR PSWEVYGLVE WSYMAWLSFR SDYIAPLVIS LSRFCTVLFL IQSLDRLVLC LGCFWIKFKK IEPKLTEESI DLEDPSSFPM
201: VLIQIPMCNE REVYEQSIGA ASQLDWPKDR ILIQVLDDSD DPNLQLLIKE EVSVWAEKGV NIIYRHRLIR TGYKAGNLKS AMTCDYVKDY EFVTIFDADF
301: TPNPDFLKKT VPHFKGNPEL GLVQARWSFV NKDENLLTRL QNINLCFHFE VEQQVNGVFL NFFGFNGTAG VWRIKALEES GGWLERTTVE DMDIAVRAHL
401: NGWKFIYLND VEVTCELPES YEAYKKQQHR WHSGPMQLFR LCLPSIIKSK ISVWKKANLI FLFFLLRKLI LPFYSFTLFC IILPLTMFIP EAELPLWIIC
501: YVPIFISLLN ILPSPKSFPF LVPYLLFENT MSITKFNAMI SGLFQFGSAY EWVVTKKTGR SSESDLLAFA EKEEKLHRRN SESGLELLSK LKEQETNLVG
601: QETVKKSLGG LMRPKNKKKT NMVFKKELGL AFLLLTAAAR SFLSAHGLHF YFLLFQGLSF LVVGLDLIGE QIS
Arabidopsis Description
CSLC4Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6R3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.