CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 3
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22653
KRH26664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G31590.1	KRH22653	AT5G22290.1	21798944
AT4G31590.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57821	Soybean	plasma membrane	33.91	97.51
KRH04930	Soybean	plasma membrane	94.81	94.81
KRH61950	Soybean	plasma membrane	86.15	86.15
KRH52609	Soybean	plasma membrane	85.71	85.71
VIT_04s0069g00780.t01	Wine grape	plasma membrane	81.53	81.41
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	77.78	77.78
AT4G31590.1	Thale cress	plasma membrane	77.63	77.75
CDX72314	Canola	plasma membrane	76.19	77.19
CDY13445	Canola	plasma membrane	76.33	77.0
Bra023993.1-P	Field mustard	plasma membrane	73.88	76.99
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	52.81	76.41
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	76.19	76.08
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	75.76	75.87
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	75.76	75.65
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	72.01	75.61
CDX76802	Canola	plasma membrane	71.86	75.45
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	74.46	75.44
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	75.04	75.36
KRH44638	Soybean	cytosol	75.61	75.18
CDY57881	Canola	extracellular	12.55	69.6
CDX68766	Canola	plasma membrane	77.49	69.29
KRH18597	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	65.95	69.24
KRG93391	Soybean	plasma membrane	65.8	69.09
KRH15467	Soybean	plasma membrane	65.51	64.95
HORVU3Hr1G000340.2	Barley	plasma membrane	60.32	64.71
KRH61452	Soybean	plasma membrane	65.66	64.27
KRH52142	Soybean	plasma membrane	65.08	63.88
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	67.68	61.96
Zm00001d049336_P001	Maize	plasma membrane	68.11	61.78
CDY60854	Canola	plasma membrane	77.49	61.37
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	66.38	61.25
TraesCSU01G038900.1	Wheat	cytosol, peroxisome, plasma membrane	66.23	61.2
KXG24822	Sorghum	peroxisome	67.1	61.18
KRH07420	Soybean	plasma membrane	61.04	60.6
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	66.23	60.55
KRH66156	Soybean	endoplasmic reticulum	60.89	59.69
Bra011284.1-P	Field mustard	plasma membrane	77.34	55.2
KRG96119	Soybean	plasma membrane	33.77	43.9
KRH67832	Soybean	plasma membrane	33.62	43.71
KRH20021	Soybean	plasma membrane	32.03	43.44
KRH32645	Soybean	plasma membrane	31.89	43.25
KRG92056	Soybean	plasma membrane	32.9	43.1
KRH55858	Soybean	cytosol	7.07	42.98
KRH34719	Soybean	plasma membrane	32.76	42.91
KRH22736	Soybean	plasma membrane	32.47	42.21
KRH25159	Soybean	endoplasmic reticulum	32.32	41.25
KRH30518	Soybean	endoplasmic reticulum	32.18	41.14
KRH67729	Soybean	plasma membrane	30.45	40.04
KRG96022	Soybean	plasma membrane	30.16	39.58

Protein Annotations

EMBL:ACUP02008797	EnsemblPlants:KRH16165	EnsemblPlantsGene:GLYMA_14G136900	EntrezGene:100797495	Gene3D:3.90.550.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7
PFAM:PF13641	ProteinID:KRH16165	ProteinID:KRH16165.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix
UniParc:UPI000233BF71	UniProt:I1M9U6	MapMan:21.2.1.1.1	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:24378248..24382617

Molecular Weight (calculated)

79656.7 Da

IEP (calculated)

8.675

GRAVY (calculated)

0.106

Length

693 amino acids

Sequence
(BLAST)

001: MAPSFDFSNR WMKETQKGTP VVVTMENPTF SVVEINGADA AFRPVEKTRG KNAKQVTWFL FLKAYHAIGC VTWFATVLWS LMGAIRKRLI DREGVTLESE
101: KMEKGKVLFT VIKVFLVSSL VVLVFEVVVY LQGWHFGNPS VHIPRAADLE GLMHLVYVAW LRFRGEYIAP PMQALSKFCI VLFLIQSVDR MVLCFGCFWI
201: KYKRIKPKID GDALKVDDIE GSACSHPMVL VQIPMCNERE VYEQSISAVC QIDWPRDRLL IQVLDDSDDE SIQWLIKTEV RKWSQKGINI IYRYRLVRTG
301: YKAGNLKSAM SCDYVKDYEF VAIFDADFQP HPDFLKQTVP YFKDNPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGAFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLNG WKFIFVNDVK VLCEVPESYE AYRKQQHRWH SGPMQLFRLC LPAILRSKIS PWKKGNLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPLWVICYI PVFMSFLNIL PAPKYFPFLV PYLLFENTMS VTKFNAMISG LFQLGSSYEW IVTKKAGRSS ESDLVAAAER
601: EVKSIMEQQK IHRGASDSVL VESNQCKEHK ETNGTPVKKA NKIYKKELTL ALLLLTASVR SLLSAQGVHF YYLLFQGVTF LLVGLDLIGQ QMS

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.