CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
golgi 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22653
KRH26664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G31590.1	KRH22653	AT5G22290.1	21798944
AT4G31590.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52609	Soybean	plasma membrane	97.69	97.69
KRH16165	Soybean	plasma membrane	86.15	86.15
KRH04930	Soybean	plasma membrane	86.0	86.0
VIT_04s0069g00780.t01	Wine grape	plasma membrane	86.0	85.88
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	82.83	82.83
AT4G31590.1	Thale cress	plasma membrane	80.52	80.64
Bra023993.1-P	Field mustard	plasma membrane	77.34	80.6
CDX72314	Canola	plasma membrane	79.37	80.41
CDY13445	Canola	plasma membrane	79.51	80.2
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	80.09	79.97
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	79.8	79.68
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	54.26	78.5
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	77.63	77.97
CDX76802	Canola	plasma membrane	74.03	77.73
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	73.88	77.58
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	76.48	77.49
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	77.34	77.46
KRH44638	Soybean	cytosol	77.49	77.04
KRH57821	Soybean	plasma membrane	26.41	75.93
CDX68766	Canola	plasma membrane	80.38	71.87
CDY57881	Canola	extracellular	12.84	71.2
KRH18597	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	67.24	70.61
KRG93391	Soybean	plasma membrane	67.1	70.45
KRH15467	Soybean	plasma membrane	67.24	66.67
HORVU3Hr1G000340.2	Barley	plasma membrane	62.05	66.56
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	71.28	65.26
KRH61452	Soybean	plasma membrane	66.38	64.97
Zm00001d049336_P001	Maize	plasma membrane	71.57	64.92
KXG24822	Sorghum	peroxisome	71.0	64.74
KRH52142	Soybean	plasma membrane	65.95	64.73
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	69.99	64.58
TraesCSU01G038900.1	Wheat	cytosol, peroxisome, plasma membrane	69.84	64.53
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	69.84	63.85
CDY60854	Canola	plasma membrane	80.52	63.77
KRH07420	Soybean	plasma membrane	62.91	62.46
KRH66156	Soybean	endoplasmic reticulum	62.63	61.39
Bra011284.1-P	Field mustard	plasma membrane	80.23	57.26
KRH67832	Soybean	plasma membrane	34.34	44.65
KRG96119	Soybean	plasma membrane	34.2	44.47
KRH20021	Soybean	plasma membrane	32.76	44.42
KRH32645	Soybean	plasma membrane	32.61	44.23
KRG92056	Soybean	plasma membrane	33.62	44.05
KRH34719	Soybean	plasma membrane	33.48	43.86
KRH55858	Soybean	cytosol	7.07	42.98
KRH22736	Soybean	plasma membrane	32.47	42.21
KRH25159	Soybean	endoplasmic reticulum	32.32	41.25
KRH30518	Soybean	endoplasmic reticulum	32.18	41.14
KRH67729	Soybean	plasma membrane	30.01	39.47
KRG96022	Soybean	plasma membrane	29.87	39.2

Protein Annotations

EntrezGene:100790397	MapMan:21.2.1.1.1	Gene3D:3.90.550.10	EMBL:ACUP02002203	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G076500
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Glyco_trans_2-like	UniProt:I1JUN4	InterPro:IPR029044
ProteinID:KRH61949.1	EnsemblPlants:KRH61950	ProteinID:KRH61950	ProteinID:KRH61950.1	InterPro:Nucleotide-diphossugar_trans	PFAM:PF13632
PANTHER:PTHR32044	PANTHER:PTHR32044:SF7	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002339360	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:6419049..6424367

Molecular Weight (calculated)

79050.5 Da

IEP (calculated)

8.776

GRAVY (calculated)

0.089

Length

693 amino acids

Sequence
(BLAST)

001: MAPRLYFSNW WTKDTLKGTP VVVKMENPTF SVVEINGADA AFRPVEKSRG KNAKQVTWVL LLRAHRAVGC VTWLATVLWA LLGAIKKRLI HGQGVSVESE
101: SDKLEKGKLL FRVIRVFLVT SLAVLAFEVV AYLQGWHFGN PTLHIPRTSD LEGLLHLAYV AWLTFRAEYI APPIQALSKF CVVLFLIQSV DRMLLCLGCF
201: WIKYRKVKPR IEGDPFKSDD VEGSASNYPM VLVQIPMCNE REVYDQSISA VCGIDWPRDR LLIQVLDDSD DESIQWLIKA EVSKWSQKGI NIIYRHRLVR
301: TGYKAGNLNS AMSCDYVKDY EFVAIFDADF QPNPDFLKQT VPHFKDNPEL GLVQARWSFV NKDENLLTRL QNINLCFHFE VEQQVNGVFL NFFGFNGTAG
401: VWRIKALEES GGWLERTTVE DMDIAVRAHL NGWKFIFLND VKVPCEVPES YEAYRKQQHR WHSGPMQLFR LSLPAIVRSK VSPWKKANLI LLFFLLRKLI
501: LPFYSFTLFC IILPLTMFVP EAELPLWVIC YVPVFMSLLN ILPSPKSFPF IVPYLLFENT MSVTKFNAMV SGLFQLGSSY EWVVTKKAGR SSESDLLAAA
601: EREAKSIEQK IHRGASDSEL IESNQLKEHK EAAPAKVKKS NKIYTKELTL AFLLLTASVR SLLSAQGVHF YFLLFQGVTF LLVGLDLIGE QMS

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.