CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023020.1-P	Field mustard	plasma membrane	98.19	98.72
CDX84607	Canola	mitochondrion	20.51	94.17
AT2G35650.1	Thale cress	plasma membrane	87.11	86.33
CDY32098	Canola	plasma membrane	84.75	86.0
CDY32110	Canola	mitochondrion	66.42	83.18
CDY40448	Canola	plasma membrane	86.21	80.24
CDY10358	Canola	plasma membrane	61.89	64.1
CDX70286	Canola	plasma membrane	61.34	63.53
CDY11268	Canola	plasma membrane	61.34	63.53
CDX69464	Canola	cytosol, peroxisome, plasma membrane	49.18	61.17
CDY47369	Canola	plasma membrane	33.03	60.67
CDY09672	Canola	golgi	38.29	59.94
CDX70677	Canola	cytosol, peroxisome, plasma membrane	48.09	59.82
CDX78675	Canola	plasma membrane	54.45	59.52
CDY26505	Canola	plasma membrane	54.99	59.06
CDY35710	Canola	plasma membrane	54.08	58.32
CDY68733	Canola	plasma membrane	28.68	58.09
CDY44151	Canola	plasma membrane	58.44	58.02
CDY09164	Canola	plasma membrane	53.54	57.84
CDY04707	Canola	plasma membrane	58.26	57.84
CDX88785	Canola	plasma membrane	53.36	57.65
CDX71011	Canola	plasma membrane	53.36	57.65
CDY26949	Canola	plasma membrane	53.18	57.45
CDY54604	Canola	plasma membrane	54.45	57.25
CDX72181	Canola	plasma membrane	54.27	57.17
CDY40295	Canola	plasma membrane	56.62	57.14
CDY01129	Canola	plasma membrane	54.27	55.58
CDX80885	Canola	plasma membrane	52.27	54.86
CDX90506	Canola	plasma membrane	53.36	53.16
CDY00138	Canola	cytosol, peroxisome, plasma membrane	37.75	45.51
CDY04011	Canola	cytosol, peroxisome, plasma membrane	37.75	45.51
CDY47368	Canola	endoplasmic reticulum, extracellular	4.72	44.83
CDY32100	Canola	cytosol	1.27	41.18
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	40.65	39.51
CDX76802	Canola	plasma membrane	42.11	35.15
CDY20029	Canola	plasma membrane	41.74	34.95
CDX86448	Canola	plasma membrane	41.38	34.7
CDX85189	Canola	plasma membrane	41.38	34.7
CDY57881	Canola	extracellular	7.8	34.4
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	41.92	33.77
CDX72314	Canola	plasma membrane	41.2	33.19
CDY13445	Canola	plasma membrane	41.2	33.04
CDX83148	Canola	plasma membrane	41.02	32.66
CDY08003	Canola	cytosol, peroxisome, plasma membrane	40.47	32.09
CDX74051	Canola	cytosol, peroxisome, plasma membrane	40.29	31.76
CDX92340	Canola	plasma membrane	53.18	31.01
CDX68766	Canola	plasma membrane	41.02	29.16
CDY60854	Canola	plasma membrane	41.02	25.83
CDX75177	Canola	cytosol	13.25	25.09
CDY47235	Canola	plasma membrane	11.25	19.02

Protein Annotations

EnsemblPlants:CDX79614	EnsemblPlantsGene:GSBRNA2T00132389001	Gene3D:3.90.550.10	GO:A0A078CUD0	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641	ProteinID:CDX79614	ProteinID:CDX79614.1	SEG:seg
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0004EE48C6	MapMan:21.2.3.1.1.1	:	:

Description

BnaC03g19500D

Coordinates

chrLK031818:+:1153371..1156147

Molecular Weight (calculated)

63267.8 Da

IEP (calculated)

8.450

GRAVY (calculated)

0.203

Length

551 amino acids

Sequence
(BLAST)

001: MSPLAIFHGL AHDTYPSLLL SMSQVRSFKA STWEDTITRI SLWWEQARAV VVVPVFKFLV ALCLIMSVML FVEMMYMGVV VAYIKLFKRK PEKVYKWVAM
101: EEDDVECGSE SFPMVLVQIP MYNEKEVCEQ SIAAACKISW PSNRIIIQVL DDSTDPASKE LVKKECERWS KEGVNITFEI RDNRKGYKAG ALREGMKHSY
201: VKQCDYVAIF DADFQPEPDF LFRTVPFLIH NPKLALVQGR WEFVNAGQCM MTRLQEMSLS YHFMVEQQVG SSTFAFFGFN GTAGVWRISA LNESGGWNDQ
301: TTVEDMDLAV RATLRGWKLL YLDDLKVKSE LPCSFNALRS QQHRWTCGPA NLFRKMAGKI IRSENVSLWK KLYMLYSFFF MRKLVAHVLS FCFYCVILPA
401: TVLFPEVTVP KWAAFYLPSL ITLLIALGRL RSIHLLAFWV LFENAMSLVR TKALVMGLFE TGRVQEWVVT EKLGDGLKTK LIAQAPEEHH VRFRDRVHLM
501: ELLVGVYLLF CGCYDIIYGK QTLFLYLLFQ SMGFFVVGFG YVGKYVAASS S

Best Arabidopsis Sequence Match ( AT2G35650.1 )
(BLAST)

001: MSPLPIFHRL PHATFSSFLL SLSQAGSSKT SVAFLNAFKS EDIIARIGLW WQLIRAVVVV PVFKFLVLLC LVMSVMFFVE VMYMGIVVLY VKLFKRKPEK
101: FYKWEAMEDD VECGSASYPM VLVQIPMYNE KEVCEQSIAA ACKISWPSNR IIIQVLDDST DPASKELVKK ECDRWSKEGV NITFEIRDNR NGYKAGALRE
201: GMRHSYVKQC DYVAIFDADF QPDPDFLHRT VPFLIHNPKL ALVQGRWEFV NAGQCMMTRL QEMSLSYHFT IEQQVGSSTF AFFGFNGTAG VWRISALNES
301: GGWNDQTTVE DMDLAVRATL RGWKFLYIDD LKVKSELPCS FKALRSQQHR WTCGPANLLR KMAGQIIRSE NVSLWKKWYM LYSFFFMRKI VAHILTFCFY
401: CVILPATVLF PEVTVPKWAA FYLPSLITLL IAIGRLRSIH LLAFWVLFEN AMSLLRAKAL VMGLFETGRV QEWVVTEKLG DTLKTKLIPQ VPNVRFRERV
501: HLLELLVGAY LLFCGIYDIV YGKNTLYVYL LFQSVAFFVV GFGFVGKYVP ASSYLA

Arabidopsis Description

CSLA7Probable mannan synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQN8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.