Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47368 | Canola | endoplasmic reticulum, extracellular | 4.96 | 12.07 |
| TraesCS7B01G296000.1 | Wheat | plasma membrane, plastid | 29.08 | 7.85 |
| Os02t0744650-00 | Rice | cytosol, mitochondrion, peroxisome, plasma membrane | 21.99 | 7.73 |
| TraesCS7B01G296100.1 | Wheat | mitochondrion, plasma membrane | 28.37 | 7.71 |
| TraesCS2B01G560100.1 | Wheat | golgi | 28.37 | 7.58 |
| TraesCS7B01G295800.1 | Wheat | plasma membrane | 26.95 | 7.38 |
| CDY47369 | Canola | plasma membrane | 15.6 | 7.33 |
| AT4G13410.1 | Thale cress | extracellular, plasma membrane | 27.66 | 7.26 |
| TraesCS7B01G494000.1 | Wheat | golgi | 26.95 | 7.25 |
| CDY01129 | Canola | plasma membrane | 27.66 | 7.25 |
| TraesCS7B01G093900.1 | Wheat | plasma membrane | 26.95 | 6.95 |
| TraesCS3B01G054500.1 | Wheat | cytosol, peroxisome, plasma membrane | 19.86 | 6.86 |
| TraesCS3B01G090900.1 | Wheat | cytosol, plasma membrane, plastid | 9.93 | 6.64 |
| TraesCS6B01G197200.1 | Wheat | plasma membrane | 24.11 | 6.56 |
| TraesCS2B01G182700.3 | Wheat | plasma membrane | 26.95 | 6.54 |
| TraesCS6B01G135100.1 | Wheat | plastid | 24.11 | 6.44 |
| TraesCS3B01G558400.1 | Wheat | plasma membrane | 25.53 | 6.3 |
| TraesCS3B01G540800.1 | Wheat | plasma membrane | 23.4 | 6.18 |
| TraesCS5B01G410400.1 | Wheat | mitochondrion | 30.5 | 6.04 |
| TraesCS1B01G345400.1 | Wheat | plasma membrane | 29.08 | 5.84 |
| Bra032705.1-P | Field mustard | plasma membrane | 29.08 | 5.76 |
| TraesCS3B01G337100.1 | Wheat | plasma membrane | 27.66 | 5.59 |
| TraesCS1B01G324200.1 | Wheat | mitochondrion | 25.53 | 5.22 |
| TraesCS3B01G000600.1 | Wheat | cytosol, peroxisome, plasma membrane | 26.24 | 4.93 |
| Os02t0744600-01 | Rice | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G370500.1 | EnsemblPlantsGene:TraesCS2B01G370500 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2B:+:528470517..528472116
Molecular Weight (calculated)
16206.3 Da
IEP (calculated)
7.804
GRAVY (calculated)
-0.318
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLCLGSWDH ARQMGSNSAA SPPELQIHDS SIEEEKNCIQ RLRNGNGWVT SQEQMTGMVS ALGHESHGSH DTVFLWCMYL VQIRRRQAKS CCFFFFRFYY
101: GYKQLLFRSS PETTAQIHLF STMPTWWSGA LTTCEGLHSR C
101: GYKQLLFRSS PETTAQIHLF STMPTWWSGA LTTCEGLHSR C
0001: MFLALTQMLL SLTLMRNSKT SWDIFRKILK VEFLLKIWFG GYGSFLSMYQ RSPVCSRPKT SPEVQQNQLG GRSNCSASSL VPQLSISGSA SKPPASDVLV
0101: KLNKFVKSSH IGTPDSKHMS DAKTSSSAPS NHKTLRFRIK VGSSDLSSLK NVSTFTKEGL NMLPSASRVN CLSEVEQDLL NGICDSPTKI LMAMVSFPLH
0201: KDQLLSPLSD DLIQLGSKEK ILKDAGYGST NKTDAKSTPD GLVVSDSQKR AGKFPIGKKE KLRDRVKYRP PSNKLDRNHT VSNTEKEADK ESCEELVSKT
0301: MKLPLLSCLS PSYIHPAKEI DNVSDSNVES ILRGTNKDAA LMGSKPELED NVVAFSDRSV KETESINVRK DVYLIKGEPL NSLESNPKRE KAPSIEHVDY
0401: SSVVKGTQSE TRNEEQILKS KLPKVQRSQK GSSSIVTMNS QRGKDAAVNI IKKNVPDKLQ EDIEESEHMC KGFFGDSKES KEEKQISPVL KAEKEKLSEE
0501: NALGESFNSV KNDEEACDHL NLVCEPDLKH LIKPSDLNED RHTTKQSVRR EVKNKHSLEG GMENMGMESE RELSGVSKKP KTGKSRFSAV DQPGSNKSNQ
0601: ILEVLDTNKT MITQALAENV KDFAKASSHG ERDDRKRKLK ENEESGDCMR LREAAVMESS GENVRKRKRL KGSSCDEKEL PFSSESCDKE RSVSQENGRD
0701: SASHLPSTLS SPSLCKDLGS EIIKNNVRES KGSLVESVAP LALRVLDSGE LKSGRISERD EYHDTDYNAG ETLKRCRDGE AYSTIDRPGT TKKAAEDSKD
0801: RERAYGEDCS IENLKPKKSG RYPGENCIEG DSKQKSREEE SSAPSKDNNW GLVNNVQDLG TAVKVKTKES RSKKRPARKV SMECNKEDSR EYQDPNTKLD
0901: RSGSHFSSRQ KPDTANTSRG KSNPLEVTTE QLKNKSASPA QVEVLGHDTE ISNTKKQRLR NDNHSVTHDE GSRNQKQNGS RHKDHVGLSP FKKESTSQTA
1001: SNSIKEATDL KHMADRLKNA VSNHESTGVY FQAALKFLHG ASLLESSGTT IARSKDIYGS TAKLCDQRN
0101: KLNKFVKSSH IGTPDSKHMS DAKTSSSAPS NHKTLRFRIK VGSSDLSSLK NVSTFTKEGL NMLPSASRVN CLSEVEQDLL NGICDSPTKI LMAMVSFPLH
0201: KDQLLSPLSD DLIQLGSKEK ILKDAGYGST NKTDAKSTPD GLVVSDSQKR AGKFPIGKKE KLRDRVKYRP PSNKLDRNHT VSNTEKEADK ESCEELVSKT
0301: MKLPLLSCLS PSYIHPAKEI DNVSDSNVES ILRGTNKDAA LMGSKPELED NVVAFSDRSV KETESINVRK DVYLIKGEPL NSLESNPKRE KAPSIEHVDY
0401: SSVVKGTQSE TRNEEQILKS KLPKVQRSQK GSSSIVTMNS QRGKDAAVNI IKKNVPDKLQ EDIEESEHMC KGFFGDSKES KEEKQISPVL KAEKEKLSEE
0501: NALGESFNSV KNDEEACDHL NLVCEPDLKH LIKPSDLNED RHTTKQSVRR EVKNKHSLEG GMENMGMESE RELSGVSKKP KTGKSRFSAV DQPGSNKSNQ
0601: ILEVLDTNKT MITQALAENV KDFAKASSHG ERDDRKRKLK ENEESGDCMR LREAAVMESS GENVRKRKRL KGSSCDEKEL PFSSESCDKE RSVSQENGRD
0701: SASHLPSTLS SPSLCKDLGS EIIKNNVRES KGSLVESVAP LALRVLDSGE LKSGRISERD EYHDTDYNAG ETLKRCRDGE AYSTIDRPGT TKKAAEDSKD
0801: RERAYGEDCS IENLKPKKSG RYPGENCIEG DSKQKSREEE SSAPSKDNNW GLVNNVQDLG TAVKVKTKES RSKKRPARKV SMECNKEDSR EYQDPNTKLD
0901: RSGSHFSSRQ KPDTANTSRG KSNPLEVTTE QLKNKSASPA QVEVLGHDTE ISNTKKQRLR NDNHSVTHDE GSRNQKQNGS RHKDHVGLSP FKKESTSQTA
1001: SNSIKEATDL KHMADRLKNA VSNHESTGVY FQAALKFLHG ASLLESSGTT IARSKDIYGS TAKLCDQRN
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: CW-type Zinc Finger (TAIR:AT3G62900.1); Has 5847 Blast hits to 4410 proteins in 438 species: Archae - 17; Bacteria - 452; Metazoa - 2463; Fungi - 354; Plants - 306; Viruses - 11; Other Eukaryotes - 2244 (s /.../ NCBI BLink). [Source:TAIR;Acc:AT1G02990]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.