CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034205_P001	Maize	plasma membrane	96.68	94.36
Os03t0770800-01	Rice	plasma membrane	80.35	93.29
Zm00001d013168_P001	Maize	plasma membrane	90.03	90.82
TraesCS5A01G405700.1	Wheat	mitochondrion	88.01	86.63
TraesCS5B01G410400.1	Wheat	mitochondrion	88.87	86.38
TraesCS5D01G415700.1	Wheat	mitochondrion	88.73	83.42
GSMUA_Achr7P00750_001	Banana	plasma membrane	72.4	80.29
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	72.11	80.23
GSMUA_Achr4P32270_001	Banana	plasma membrane	73.27	79.47
GSMUA_Achr5P01920_001	Banana	plasma membrane	73.84	79.35
KXG34323	Sorghum	plasma membrane	77.17	78.3
GSMUA_Achr6P30200_001	Banana	cytosol	69.65	78.12
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	63.29	77.25
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	77.6	76.28
KXG22328	Sorghum	plasma membrane	76.3	75.75
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	75.0	75.33
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.86	74.11
KRH15467	Soybean	plasma membrane	74.13	73.39
Bra000635.1-P	Field mustard	plasma membrane	73.27	73.27
CDX83148	Canola	plasma membrane	73.12	73.12
KRH61452	Soybean	plasma membrane	74.28	72.6
KRH52142	Soybean	plasma membrane	73.7	72.24
AT4G07960.1	Thale cress	plasma membrane	72.54	71.82
PGSC0003DMT400030125	Potato	plasma membrane	67.49	70.12
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	69.36	69.77
Solyc04g077470.2.1	Tomato	plasma membrane	72.25	67.39
PGSC0003DMT400012668	Potato	plasma membrane	72.11	67.25
KXG35666	Sorghum	mitochondrion, plasma membrane	66.04	65.29
KXG24822	Sorghum	peroxisome	64.45	58.68
EES06436	Sorghum	plasma membrane	32.37	42.99
KXG20409	Sorghum	plasma membrane, plastid	33.24	42.91
OQU76114	Sorghum	plasma membrane	29.91	42.24
EER95427	Sorghum	plasma membrane	31.21	39.49
EER97593	Sorghum	plasma membrane	32.23	38.92
OQU89056	Sorghum	mitochondrion, plasma membrane	30.92	38.91
KXG30765	Sorghum	plasma membrane	29.91	38.05
KXG25219	Sorghum	plasma membrane	31.36	37.48
OQU91819	Sorghum	plasma membrane	30.49	34.14

Protein Annotations

EnsemblPlants:EER90820	EnsemblPlantsGene:SORBI_3001G075600	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF47	PFAM:PF13641	ProteinID:EER90820
ProteinID:EER90820.2	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	unigene:Sbi.12655	UniParc:UPI0003C6E193
UniProt:C5WZ79	MapMan:21.2.1.1.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:5766804..5771415

Molecular Weight (calculated)

77781.7 Da

IEP (calculated)

8.493

GRAVY (calculated)

0.086

Length

692 amino acids

Sequence
(BLAST)

001: MAPWSGLWGG KAGGDAYRGT PVVVKMENPN WSISEISSPE DDDEDILAAG GRRKGGRSKN AKQIRWVLLL KAHRAAGCLA SLASTAVALG GAARRRVAAG
101: RTDAEAGVVA ATGESPVVRS RFYAFIKAFL VVSLLLLAVE VAAYFSGWDL AASALAIPVI GLESLYASWL RFRATYVAPG IQFLTDACVV LFLIQSADRL
201: IQCLGCFYIH IKRIKPKPKS LALPDAEDPD AGYYPMVLVQ IPMCNEKEVY QQSIAAVCNL DWPKSNFLVQ VLDDSDDPLT QTLIREEVAK WQQQGARIVY
301: RHRVLRDGYK AGNLKSAMSC SYVKDYEFVA IFDADFQPHP DFLKRTVPHF KDNDELGLVQ ARWSFVNKDE NLLTRLQYIN LCFHFEVEQQ VNGVFLNFFG
401: FNGTAGVWRI KALEDSGGWM ERTTVEDMDI AVRAHLHGWK FIFLNDVECQ CELPESYEAY RKQQHRWHSG PMQLFRLCLP DIIKCKIAFW KKANLIFLFF
501: LLRKLILPFY SFTLFCIILP MTMFVPEAEL PDWVVCYIPA LMSLLNILPS PKSFPFIIPY LLFENTMSVT KFNAMISGLF QLGSAYEWVV TKKSGRSSEG
601: DLISLAPKEL KHLKTGSAPN LDAVAKEQLA SKKDAKKKHN RIYKKELALS MLLLTAAARS LLSKQGIHFY FLLFQGISFL LVGLDLIGEQ VE

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.