Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048319_P003 | Maize | plasma membrane | 89.03 | 87.75 |
| Os03t0169500-01 | Rice | plasma membrane | 82.63 | 82.33 |
| OQU91819 | Sorghum | plasma membrane | 75.14 | 66.5 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 61.43 | 62.8 |
| OQU76114 | Sorghum | plasma membrane | 55.76 | 62.24 |
| EES06436 | Sorghum | plasma membrane | 57.22 | 60.08 |
| KXG20409 | Sorghum | plasma membrane, plastid | 58.87 | 60.07 |
| EER97593 | Sorghum | plasma membrane | 58.87 | 56.2 |
| KXG25219 | Sorghum | plasma membrane | 57.95 | 54.75 |
| OQU89056 | Sorghum | mitochondrion, plasma membrane | 54.66 | 54.36 |
| KXG30765 | Sorghum | plasma membrane | 52.65 | 52.94 |
| KXG33450 | Sorghum | mitochondrion, peroxisome, plasma membrane | 40.4 | 32.08 |
| KXG22328 | Sorghum | plasma membrane | 40.77 | 31.99 |
| KXG35666 | Sorghum | mitochondrion, plasma membrane | 40.77 | 31.86 |
| KXG34323 | Sorghum | plasma membrane | 39.67 | 31.82 |
| EER90820 | Sorghum | plasma membrane | 39.49 | 31.21 |
| KXG24822 | Sorghum | peroxisome | 38.21 | 27.5 |
Protein Annotations
| EnsemblPlants:EER95427 | EnsemblPlantsGene:SORBI_3001G490000 | EntrezGene:8059816 | Gene3D:3.90.550.10 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Glyco_trans_2-like | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF43 |
| PFAM:PF13632 | ProteinID:EER95427 | ProteinID:EER95427.1 | RefSeq:XP_002468429.1 | SEG:seg | SUPFAM:SSF53448 |
| TMHMM:TMhelix | UniParc:UPI0001A82F05 | UniProt:C5WWR7 | MapMan:21.2.3.1.1.1 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:76017041..76021255
Molecular Weight (calculated)
61791.6 Da
IEP (calculated)
7.202
GRAVY (calculated)
0.213
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MELEGLWARV LLDAASAAAP GDRAAWAAVR ARAVAPVLEA AVWACLAMSV MLVLEVCYMS VASFVAVNLL RRTPERRYRW EPMPSGTAGG QQDDEEAAVG
101: SGGGEAYPMV LVQIPMYNER EVYKLSIGAA CALTWPLDRI IIQVLDDSTD PFIKELVELE CEDWARKKIN IKYETRESRK GYKAGALKKG MEQGYAQECD
201: FVAIFDADFQ PDPDFLLRTI PFLVHNPKIA LVQTRWEFVN YNICLLTRIQ KMSLDYHFKV EQESGSSMHA FFGFNGTAGV WRVSAIREAG GWKDRTTVED
301: MDLAVRASLK GWQFLYVGDI RVKSELPSTF KAYRHQQHRW TCGAANLFRK MAGDIVRSKG VTVWKKLHLL YSFFFVRRVI APILTFLFYC VVIPLSVMVP
401: EVSIPVWGMF YIPTAITVMN AIRNPWSIHL VPIWILFENV MSMHRMRAAL TGLLETMYVD EWVVTEKVGD HVKGKLEIPL LTPVKPTECV ERIYVPELLV
501: AFYLLLCASY DVVLGTGHCY LYIFLQAFAF LVLGFGFVGT ATPCSCP
101: SGGGEAYPMV LVQIPMYNER EVYKLSIGAA CALTWPLDRI IIQVLDDSTD PFIKELVELE CEDWARKKIN IKYETRESRK GYKAGALKKG MEQGYAQECD
201: FVAIFDADFQ PDPDFLLRTI PFLVHNPKIA LVQTRWEFVN YNICLLTRIQ KMSLDYHFKV EQESGSSMHA FFGFNGTAGV WRVSAIREAG GWKDRTTVED
301: MDLAVRASLK GWQFLYVGDI RVKSELPSTF KAYRHQQHRW TCGAANLFRK MAGDIVRSKG VTVWKKLHLL YSFFFVRRVI APILTFLFYC VVIPLSVMVP
401: EVSIPVWGMF YIPTAITVMN AIRNPWSIHL VPIWILFENV MSMHRMRAAL TGLLETMYVD EWVVTEKVGD HVKGKLEIPL LTPVKPTECV ERIYVPELLV
501: AFYLLLCASY DVVLGTGHCY LYIFLQAFAF LVLGFGFVGT ATPCSCP
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.