CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90820	Sorghum	plasma membrane	78.3	77.17
Os07t0124750-00	Rice	plasma membrane	80.79	77.06
TraesCS1D01G312700.1	Wheat	plasma membrane	77.27	76.38
HORVU1Hr1G067470.1	Barley	plasma membrane	76.25	75.69
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	76.1	75.22
GSMUA_Achr7P00750_001	Banana	plasma membrane	68.48	74.84
GSMUA_Achr4P32270_001	Banana	plasma membrane	69.94	74.76
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	68.18	74.76
TraesCS1B01G324200.1	Wheat	mitochondrion	75.51	74.64
GSMUA_Achr5P01920_001	Banana	plasma membrane	68.92	72.98
GSMUA_Achr6P30200_001	Banana	cytosol	65.4	72.29
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	57.77	69.49
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	71.55	69.32
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	69.35	68.65
KXG22328	Sorghum	plasma membrane	69.5	68.01
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	68.04	66.38
KRH15467	Soybean	plasma membrane	67.6	65.95
Bra000635.1-P	Field mustard	plasma membrane	66.86	65.9
CDX83148	Canola	plasma membrane	66.86	65.9
AT4G07960.1	Thale cress	plasma membrane	66.42	64.81
KRH52142	Soybean	plasma membrane	66.86	64.59
KRH61452	Soybean	plasma membrane	67.01	64.55
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	63.78	63.23
PGSC0003DMT400030125	Potato	plasma membrane	61.73	63.21
KXG35666	Sorghum	mitochondrion, plasma membrane	64.08	62.43
PGSC0003DMT400012668	Potato	plasma membrane	65.54	60.24
Solyc04g077470.2.1	Tomato	plasma membrane	65.54	60.24
KXG24822	Sorghum	peroxisome	62.17	55.79
EES06436	Sorghum	plasma membrane	34.02	44.53
KXG20409	Sorghum	plasma membrane, plastid	33.87	43.1
OQU76114	Sorghum	plasma membrane	30.35	42.24
OQU89056	Sorghum	mitochondrion, plasma membrane	32.4	40.18
EER95427	Sorghum	plasma membrane	31.82	39.67
EER97593	Sorghum	plasma membrane	33.14	39.44
KXG30765	Sorghum	plasma membrane	31.09	38.97
KXG25219	Sorghum	plasma membrane	31.23	36.79
OQU91819	Sorghum	plasma membrane	31.52	34.79

Protein Annotations

EnsemblPlants:KXG34323	EnsemblPlantsGene:SORBI_3002G022700	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF47	PFAM:PF13641	ProteinID:KXG34323
ProteinID:KXG34323.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00081AE1C4	UniProt:A0A1B6Q8S8
MapMan:21.2.1.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:2072471..2075395

Molecular Weight (calculated)

76822.0 Da

IEP (calculated)

8.927

GRAVY (calculated)

-0.037

Length

682 amino acids

Sequence
(BLAST)

001: MAPWSGLWGG RAVLAGGDAY RGTPVVVRME NPNSWSISEI NDDDDDDYGG GQRRRRRRRR GKNAKQITWV LLLNAHRAAG CLAWLASAAV ALGCAARRRV
101: AAGRTDADDG APAPAPTPTP PPTPRRSRLY AFIRALLLLS LFLLAAELAA HANGRRLAAA AVSLGSLHAS WVRFRAAYVA PPLQRLADAC VALFLVQSAD
201: RVAQCLGCLY IRLRRVRPEP VSPPAVPDAE DPDAGYFPMV LVQIPMCNEK EVYQQSIAAV CNLDWPRSSL LVQVLDDSDE PVTQALIREE VDKWRHHGAR
301: IVYRHRVLRD GYKAGNLKSA MSCSYVKDYE YVAIFDADFQ PYPDFLRRTV PHFMDNEELG LVQARWSFVN KDENLLTRLQ NINLCFHFEV EQQVNGVFIN
401: FFGFNGTAGV WRIRALEDSG GWMERTTVED MDVAVRAHLK GWKFIFLNDV ECQCELPESY EAYRKQQHRW HSGPMQLFRL CLPDIIRCKL SVWKKANLIL
501: LFFLLRKLIL PFYSFTLFCI ILPLTMFVPE ASLPDWVVCY VPALMSLLNV VPAPRSFPFV IPYLLFENTM SVTKFNAMVS GLFQLRGAYE WVVTKKSGRC
601: PSSSEHEQET TKQPGKTTTT ATATATAKYN RMYKKELALS LLLLTAAARS LLSKQGTHFY FLLFQGVSFL LVGLDLIGED VK

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.