Factsheet for GSMUA_Achr6P30200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
golgi 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	86.55	85.85
GSMUA_Achr4P32270_001	Banana	plasma membrane	84.44	81.66
GSMUA_Achr7P00750_001	Banana	plasma membrane	81.85	80.93
GSMUA_Achr5P01920_001	Banana	plasma membrane	83.63	80.12
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	70.34	76.54
Os01t0766900-01	Rice	golgi, plasma membrane	20.91	75.0
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	84.93	74.43
Os03t0770800-01	Rice	plasma membrane	69.85	72.32
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	81.04	71.53
Bra000635.1-P	Field mustard	plasma membrane	78.93	70.38
GSMUA_Achr4P02100_001	Banana	plasma membrane	67.59	70.32
CDX83148	Canola	plasma membrane	78.77	70.23
EER90820	Sorghum	plasma membrane	78.12	69.65
GSMUA_Achr7P19790_001	Banana	mitochondrion	15.4	69.34
Zm00001d013168_P001	Maize	plasma membrane	76.99	69.24
AT4G07960.1	Thale cress	plasma membrane	78.44	69.24
Os05t0510800-01	Rice	plasma membrane	77.15	69.19
KRH15467	Soybean	plasma membrane	78.28	69.1
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	76.82	68.8
KRH61452	Soybean	plasma membrane	78.93	68.79
KRH52142	Soybean	plasma membrane	78.44	68.56
Zm00001d012666_P003	Maize	plasma membrane	76.17	68.31
Zm00001d043336_P001	Maize	plasma membrane	75.2	67.94
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	75.69	67.88
KXG22328	Sorghum	plasma membrane	76.66	67.86
Zm00001d034205_P001	Maize	plasma membrane	77.96	67.84
PGSC0003DMT400030125	Potato	plasma membrane	73.1	67.72
GSMUA_Achr4P05880_001	Banana	plasma membrane	65.8	67.67
TraesCS5A01G405700.1	Wheat	mitochondrion	76.99	67.57
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	68.56	67.14
TraesCS5B01G410400.1	Wheat	mitochondrion	77.47	67.13
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	66.94	66.94
TraesCS1B01G345400.1	Wheat	plasma membrane	76.01	66.81
TraesCS1D01G334400.1	Wheat	plasma membrane	75.85	66.67
TraesCS1A01G331800.1	Wheat	plasma membrane	75.85	66.67
HORVU1Hr1G077230.2	Barley	plasma membrane	75.53	66.67
HORVU3Hr1G074570.1	Barley	plasma membrane	75.2	66.67
TraesCS3B01G337100.1	Wheat	plasma membrane	75.36	66.62
TraesCS1D01G312700.1	Wheat	plasma membrane	73.91	66.09
HORVU1Hr1G067470.1	Barley	plasma membrane	73.58	66.08
TraesCS3A01G299500.1	Wheat	plasma membrane	75.36	66.05
TraesCS3D01G302300.1	Wheat	plasma membrane	75.36	66.05
GSMUA_Achr3P28000_001	Banana	plasma membrane	68.07	65.93
Zm00001d038676_P001	Maize	plasma membrane	74.88	65.81
TraesCS1B01G324200.1	Wheat	mitochondrion	73.42	65.65
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	73.42	65.65
KXG34323	Sorghum	plasma membrane	72.29	65.4
Os07t0124750-00	Rice	plasma membrane	75.69	65.31
TraesCS5D01G415700.1	Wheat	mitochondrion	77.47	64.95
Solyc04g077470.2.1	Tomato	plasma membrane	77.63	64.56
PGSC0003DMT400012668	Potato	plasma membrane	77.31	64.29
GSMUA_Achr6P27800_001	Banana	plasma membrane	64.51	61.61
GSMUA_Achr11P...	Banana	plasma membrane	32.25	45.54
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	13.78	44.74
GSMUA_Achr9P26980_001	Banana	plasma membrane	21.07	43.48
GSMUA_Achr6P07540_001	Banana	plasma membrane	36.47	42.61
GSMUA_Achr10P...	Banana	plasma membrane	36.14	41.84
GSMUA_Achr10P...	Banana	plasma membrane	35.66	41.83
GSMUA_Achr2P20260_001	Banana	plasma membrane	35.98	41.65
GSMUA_AchrUn_...	Banana	plasma membrane	34.85	40.87
GSMUA_Achr6P02600_001	Banana	extracellular, plasma membrane	31.93	40.45
GSMUA_Achr6P13400_001	Banana	plasma membrane	35.49	40.41
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	31.93	36.82
GSMUA_Achr5P15920_001	Banana	plasma membrane	35.66	36.67
GSMUA_Achr7P21070_001	Banana	plasma membrane	31.6	36.65
GSMUA_Achr7P18150_001	Banana	plasma membrane	31.77	36.16
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	35.17	32.15

Protein Annotations

EnsemblPlants:GSMUA_Achr6P30200_001	EnsemblPlants:GSMUA_Achr6T30200_001	EnsemblPlantsGene:GSMUA_Achr6G30200_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF45	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000294A266	UniProt:M0TBG5	MapMan:21.2.1.1.1

Description

Probable xyloglucan glycosyltransferase 12 [Source:GMGC_GENE;Acc:GSMUA_Achr6G30200_001]

Coordinates

chr6:+:30259988..30263845

Molecular Weight (calculated)

70632.0 Da

IEP (calculated)

7.439

GRAVY (calculated)

0.077

Length

617 amino acids

Sequence
(BLAST)

001: MAPSFHWWGK DDYRGTSVIV KMENPNWSIS EMSSPDGDGN EYGNAKQFTW VLLLKAHRAA GCLTSLASAA VGLASAVRRR VAAYLKGWHL GTIELQRLLV
101: MPASFGAWGL FETLYAEWVQ LRSEYIAPIL QFLANTCVIL FLIQSADRLI LCLGCFWIRF KKIQPVPMQA VGKDPESGGE DFPMVLVQIP MCNEKEVYQQ
201: SIAAVCNLDW PRSNILIQVL DDSDDPTTRT MIEEEVEKWQ QNGARIVYRH RVLREGYKAG NLKSAMNCGY VKDYEFVAIF DADFQPSPDF LKRTIPHFNE
301: NEELGLVQAR WAFVNKGENL LTRLQNINLC FHFEVEQQVN GVYLNFFGFN GTAGVWRIKA LEDVGGWLER TTVEDMDIAV RAHLKGWKFI FLNDVECLCE
401: LPESYEAYRK QQHRWHSGPM QLFRLCLPDI LRSKIGFWKK SNLILLFFLL RKLILPFYSF TLFCIILPMT MFIPEAELPA WVVCYVPATM SFLSILPAPR
501: SFPFIVPYLL FENTMSVTKF SAMISGLFQL GSAYEWVVTK KSGRSSEGDL FSLSQLKKES KQKHNRIYRK ELALAFLLLT ASLRSLLSAQ GIHFYFLLFQ
601: GISFLLVGLD LIGEQIE

Best Arabidopsis Sequence Match ( AT2G24630.1 )
(BLAST)

001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Arabidopsis Description

CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.