Factsheet for GSMUA_Achr3P28000_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P05880_001	Banana	plasma membrane	83.36	88.5
GSMUA_Achr4P02100_001	Banana	plasma membrane	78.49	84.32
Os09t0428000-00	Rice	cytosol, peroxisome	61.54	80.82
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	77.24	79.74
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	76.92	77.78
GSMUA_Achr7P19790_001	Banana	mitochondrion	16.01	74.45
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	76.92	70.81
KRH44638	Soybean	cytosol	76.45	69.87
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	75.04	68.38
KXG35666	Sorghum	mitochondrion, plasma membrane	74.88	68.14
GSMUA_Achr6P30200_001	Banana	cytosol	65.93	68.07
GSMUA_Achr5P01920_001	Banana	plasma membrane	68.76	68.01
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	65.46	67.04
GSMUA_Achr7P00750_001	Banana	plasma membrane	64.84	66.19
GSMUA_Achr4P32270_001	Banana	plasma membrane	65.93	65.83
GSMUA_Achr6P27800_001	Banana	plasma membrane	63.58	62.69
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	68.6	62.07
GSMUA_Achr11P...	Banana	plasma membrane	31.08	45.31
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	13.03	43.68
GSMUA_Achr9P26980_001	Banana	plasma membrane	20.09	42.81
GSMUA_Achr10P...	Banana	plasma membrane	35.16	42.03
GSMUA_AchrUn_...	Banana	plasma membrane	34.69	42.02
GSMUA_Achr6P07540_001	Banana	plasma membrane	34.69	41.86
GSMUA_Achr10P...	Banana	plasma membrane	34.22	41.44
GSMUA_Achr6P13400_001	Banana	plasma membrane	35.01	41.14
GSMUA_Achr2P20260_001	Banana	plasma membrane	34.07	40.71
GSMUA_Achr6P02600_001	Banana	extracellular, plasma membrane	30.93	40.45
GSMUA_Achr7P21070_001	Banana	plasma membrane	30.93	37.03
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	30.93	36.82
GSMUA_Achr7P18150_001	Banana	plasma membrane	31.24	36.72
GSMUA_Achr5P15920_001	Banana	plasma membrane	33.75	35.83
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	34.07	32.15

Protein Annotations

EnsemblPlants:GSMUA_Achr3P28000_001	EnsemblPlants:GSMUA_Achr3T28000_001	EnsemblPlantsGene:GSMUA_Achr3G28000_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000296FB8D	UniProt:M0SIG6	MapMan:21.2.1.1.1

Description

Probable xyloglucan glycosyltransferase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr3G28000_001]

Coordinates

chr3:+:27404014..27407027

Molecular Weight (calculated)

72811.4 Da

IEP (calculated)

8.305

GRAVY (calculated)

0.206

Length

637 amino acids

Sequence
(BLAST)

001: MAPSLDFSDW WAKEIRSGTP VVVTMQNPNY SVLEVDGPGA AAFRPADKGR GRNAKQVTWV LLLKAHRAVG CVAWLAAGLW GFLVLSIAML ALEMIAYWKG
101: WHFKKPNLQL PESLHMPETT EIQGWMHNAY LCWLAFRSNY IAYPIQVLSN FCIVLFMIQS LDRMILCLGC FWIKLKKIKP TIDSESFKAD DVESSGSEYP
201: MVLIQIPMCN EREVYEQSIS AACQIDWPRD RVLVQVLDDS NDETIMLLIR AEVSKWSQRG VNIVYRHRLV RTGYKAGNLK SAMSCDYVKD YEFVAIFDAD
301: FTPNPDFLKK TIPHFKGNPE LGLVQARWSF VNKDENLLTR LQNINLCFHF EVEQQVNGVF LNFFGFNGTA GVWRIKALED SGGWLERTTV EDMDIAVRAH
401: LNGWKFIFLN DVKVLCEVPE SYEAYRKQQH RWHSGPMQLF RLCLPAILKS KISVWKKANL ILLFFLLRKL ILPFYSFTLF CVILPLSMFV PEAELPLWVI
501: CYIPVIMSFL NILPAPRSFP FIVPYLLFEN TMSVTKFNAM VVGLFQLGSS YEWIVTKKAG RSSESDLLVA AERCSKPVGH LQLHRGLYKK ELALALLLLT
601: AAVRSLLSAQ GIHFYFLLFQ GVSFLLVGLD LIGEQMV

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.