Factsheet for GSMUA_AchrUn_randomP04290_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0040g01340.t01	Wine grape	extracellular, plasma membrane	66.16	72.5
PGSC0003DMT400009922	Potato	plasma membrane	32.32	69.96
GSMUA_Achr10P...	Banana	plasma membrane	64.83	64.83
KRH67729	Soybean	plasma membrane	64.64	64.52
GSMUA_Achr10P...	Banana	plasma membrane	65.21	64.35
KRG96022	Soybean	plasma membrane	64.26	64.02
TraesCS1A01G010500.1	Wheat	extracellular, plasma membrane	51.52	63.76
GSMUA_Achr2P20260_001	Banana	plasma membrane	63.69	62.85
GSMUA_Achr6P13400_001	Banana	plasma membrane	64.26	62.36
GSMUA_Achr6P07540_001	Banana	plasma membrane	61.79	61.55
GSMUA_Achr9P26980_001	Banana	plasma membrane	34.79	61.2
TraesCS2D01G532800.1	Wheat	plasma membrane	60.84	60.84
TraesCS2A01G530900.1	Wheat	golgi	60.84	60.72
TraesCS2B01G560100.1	Wheat	golgi	60.84	60.61
Zm00001d043716_P001	Maize	mitochondrion, plasma membrane	61.79	60.52
Zm00001d043714_P001	Maize	cytosol	44.11	59.49
OQU89056	Sorghum	mitochondrion, plasma membrane	61.6	58.91
TraesCS7D01G544700.1	Wheat	golgi	57.79	58.46
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	21.1	58.42
GSMUA_Achr11P...	Banana	plasma membrane	48.48	58.35
GSMUA_Achr6P02600_001	Banana	extracellular, plasma membrane	53.61	57.91
TraesCS7B01G494000.1	Wheat	golgi	57.6	57.82
Zm00001d043719_P001	Maize	plasma membrane	20.91	55.84
Zm00001d005305_P001	Maize	plasma membrane	23.38	54.42
HORVU4Hr1G000610.1	Barley	endoplasmic reticulum, plasma membrane, plastid	60.27	54.1
GSMUA_Achr5P15920_001	Banana	plasma membrane	60.65	53.17
GSMUA_Achr7P21070_001	Banana	plasma membrane	52.66	52.07
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	52.66	51.78
GSMUA_Achr7P18150_001	Banana	plasma membrane	52.28	50.74
GSMUA_Achr7P19790_001	Banana	mitochondrion	12.55	48.18
Os09t0572500-01	Rice	golgi, mitochondrion, plasma membrane, plastid	44.68	43.44
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	52.66	41.04
GSMUA_Achr4P05880_001	Banana	plasma membrane	41.83	36.67
GSMUA_Achr4P02100_001	Banana	plasma membrane	40.87	36.26
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	41.83	35.37
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	41.25	35.17
GSMUA_Achr6P30200_001	Banana	cytosol	40.87	34.85
GSMUA_Achr3P28000_001	Banana	plasma membrane	42.02	34.69
GSMUA_Achr7P00750_001	Banana	plasma membrane	40.87	34.46
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	41.25	34.44
GSMUA_Achr6P27800_001	Banana	plasma membrane	41.83	34.06
GSMUA_Achr4P32270_001	Banana	plasma membrane	41.06	33.86
GSMUA_Achr5P01920_001	Banana	plasma membrane	40.87	33.39
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	41.83	31.25

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP04290_001	EnsemblPlants:GSMUA_AchrUn_randomT04290_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG04290_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002957B1C	UniProt:M0U691	MapMan:21.2.3.1.1.1

Description

Mannan synthase 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04290_001]

Coordinates

chrchrUn_random:+:18009661..18011960

Molecular Weight (calculated)

60822.7 Da

IEP (calculated)

8.743

GRAVY (calculated)

0.203

Length

526 amino acids

Sequence
(BLAST)

001: MRNPVLVEGA GDGAAVGERL LVLWRQIRTP MVVPLLWALM YACAFMSVML FVERVYMAIV IVLVKLLRIK RYTKYKLDSM RQEMEAEESH PMVLVQIPMF
101: NEKEVYRLSI GAACAMSWPS NKMIVQVLDD STDPVIKEMV EYECQSWASK GVNVEYEFRN SRSGYKAGAL REGLEKSYAK DCDFVAIFDA DFQPDPDYLW
201: RTIPFLLTNP ELALVQARWK FVNADECLLT RLQEMSLDYH FSVEQEVGSS TYSFFGFNGT AGVWRMQALV DAGGWKDRTT VEDMDLAVRA SLRGWKFVFV
301: GDLAVKNELP STFKAYRFQQ HRWSCGPANL FRKMLKEILC CKRVSAWKKF HVIYDFFFVR KIVAHFVTFF FYCVIIPACV LLPDVHLPKF IAVYIPSATT
401: VLNAICTPRS FHLIIFWILF ENVMAMHRAK ATIIGLLEAN RVYEWIVTAK LGNASRNKNS SRSHRRSRCR IVERIHLMEV LMGLFLLYCT IYDIMFGRDL
501: FYVYLFAQSM AFFVVGFGYV GVYVSN

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.