Factsheet for GSMUA_Achr6P02600_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	64.48	71.85
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	24.23	62.11
GSMUA_Achr9P26980_001	Banana	plasma membrane	37.78	61.54
GSMUA_Achr7P21070_001	Banana	plasma membrane	63.66	58.27
GSMUA_Achr10P...	Banana	plasma membrane	62.83	58.17
GSMUA_Achr2P20260_001	Banana	plasma membrane	63.45	57.97
GSMUA_Achr10P...	Banana	plasma membrane	62.22	56.85
GSMUA_Achr6P13400_001	Banana	plasma membrane	63.04	56.64
GSMUA_Achr6P07540_001	Banana	plasma membrane	60.99	56.25
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	58.93	53.64
GSMUA_AchrUn_...	Banana	plasma membrane	57.91	53.61
GSMUA_Achr7P18150_001	Banana	plasma membrane	58.52	52.58
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	68.79	49.63
GSMUA_Achr5P15920_001	Banana	plasma membrane	60.37	49.0
GSMUA_Achr7P19790_001	Banana	mitochondrion	13.14	46.72
GSMUA_Achr4P02100_001	Banana	plasma membrane	41.27	33.9
GSMUA_Achr4P05880_001	Banana	plasma membrane	41.68	33.83
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	42.09	33.23
GSMUA_Achr7P00750_001	Banana	plasma membrane	41.27	32.21
GSMUA_Achr6P30200_001	Banana	cytosol	40.45	31.93
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	40.66	31.83
GSMUA_Achr4P32270_001	Banana	plasma membrane	41.48	31.66
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	40.86	31.59
GSMUA_Achr5P01920_001	Banana	plasma membrane	41.07	31.06
GSMUA_Achr6P27800_001	Banana	plasma membrane	41.07	30.96
GSMUA_Achr3P28000_001	Banana	plasma membrane	40.45	30.93
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	41.27	28.55

Protein Annotations

EnsemblPlants:GSMUA_Achr6P02600_001	EnsemblPlants:GSMUA_Achr6T02600_001	EnsemblPlantsGene:GSMUA_Achr6G02600_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000295AB64	UniProt:M0T3K8	MapMan:21.2.3.1.1.1

Description

Glucomannan 4-beta-mannosyltransferase 9 [Source:GMGC_GENE;Acc:GSMUA_Achr6G02600_001]

Coordinates

chr6:-:1692068..1694243

Molecular Weight (calculated)

55842.5 Da

IEP (calculated)

8.867

GRAVY (calculated)

0.133

Length

487 amino acids

Sequence
(BLAST)

001: MSIILLIEKV SMALVSLYVK VFRRKPEKIY KWEPIQADEE LGSSVHPMVL VQVPMFNERE VYKLSVGAVC SLSWPPDRLI IQVLDDSTDL AIREMVRSEC
101: EKWIRKGITV HYISRDNRNG YKAGAMKEAM EIDYVRQCDY VAIFDADFQP ASDFLVRTVP FLMHNPEIAL VQARWKFVNA DECLMTKIQE MSLNYHFKVE
201: QQAGSSTIEF FGFNGTAGVW RISAMVEVEG WKERTTVEDM DLAVRASLAG WKFLYVGNVK VKNELPSTFK AYRFQQHRWS CGPANLFKKM AVEIITAKKV
301: SMVKKFFMLY NFFFARRVIA HNVTFFFYCM IIPLSCFFPE IQIPKWGVIY IPSAITLLSA VATPSSIHLI IFWILFENVM SWHRCKAVFI GLTEANRVNE
401: WIVTEKLGDT MKTKPAAAAA APKKSKTKCW ERIQFDEIGI GAFLVACATY DFVHNTDRYF MYIYPLALSF ILMGVGYAGT FVPGGGK

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.