Factsheet for GSMUA_Achr4P05880_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P02100_001	Banana	plasma membrane	83.5	84.49
GSMUA_Achr3P28000_001	Banana	plasma membrane	88.5	83.36
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	83.17	80.88
Os09t0428000-00	Rice	cytosol, peroxisome	64.83	80.21
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	83.0	79.05
GSMUA_Achr7P19790_001	Banana	mitochondrion	16.83	73.72
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	80.0	69.36
KRH44638	Soybean	cytosol	79.0	68.01
KXG35666	Sorghum	mitochondrion, plasma membrane	79.0	67.71
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	78.67	67.53
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	68.83	66.4
GSMUA_Achr7P00750_001	Banana	plasma membrane	68.67	66.03
GSMUA_Achr5P01920_001	Banana	plasma membrane	70.83	65.99
GSMUA_Achr6P30200_001	Banana	cytosol	67.67	65.8
GSMUA_Achr4P32270_001	Banana	plasma membrane	69.33	65.2
GSMUA_Achr6P27800_001	Banana	plasma membrane	66.0	61.3
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	70.0	59.66
GSMUA_Achr11P...	Banana	plasma membrane	33.5	46.0
GSMUA_Achr9P26980_001	Banana	plasma membrane	21.83	43.81
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	13.83	43.68
GSMUA_Achr6P07540_001	Banana	plasma membrane	37.0	42.05
GSMUA_AchrUn_...	Banana	plasma membrane	36.67	41.83
GSMUA_Achr6P02600_001	Banana	extracellular, plasma membrane	33.83	41.68
GSMUA_Achr10P...	Banana	plasma membrane	36.5	41.63
GSMUA_Achr6P13400_001	Banana	plasma membrane	37.17	41.14
GSMUA_Achr10P...	Banana	plasma membrane	36.5	41.09
GSMUA_Achr2P20260_001	Banana	plasma membrane	36.33	40.9
GSMUA_Achr7P21070_001	Banana	plasma membrane	33.33	37.59
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	33.5	37.57
GSMUA_Achr7P18150_001	Banana	plasma membrane	33.0	36.53
GSMUA_Achr5P15920_001	Banana	plasma membrane	36.0	36.0
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	36.33	32.3

Protein Annotations

EnsemblPlants:GSMUA_Achr4P05880_001	EnsemblPlants:GSMUA_Achr4T05880_001	EnsemblPlantsGene:GSMUA_Achr4G05880_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002955D77	UniProt:M0SLF5	MapMan:21.2.1.1.1

Description

Probable xyloglucan glycosyltransferase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr4G05880_001]

Coordinates

chr4:+:4555420..4558020

Molecular Weight (calculated)

68760.4 Da

IEP (calculated)

9.028

GRAVY (calculated)

0.158

Length

600 amino acids

Sequence
(BLAST)

001: MASSLDLSAW WAKKIRNGTP VVVTMQNPNY SVVEIDGPGA AAFRSMDKDR GKNAKQFTWV LLLKAHRAPG KGRSLLRFLR AFLVLSIRGW MHTAYLSWLA
101: FRADYIAYPI QVVTNFCIVL FIIQSLDRMI LCLGCFWIKL KKIKPSINGD PFKSDHIEGS GSEYPMVLVQ IPMCNEREVY EQSISAACQI DWPRDRLLVQ
201: VLDDSDDETI ELLIRAEVSK WSQRGVNIVY RHRLIRTGYK AGNLKSAMSC DYVKDFEFVA IFDADFTPNP DFLKKTIPHF KRNPELGLVQ ARWSFVNKDE
301: NLLTRLQNIN LCFHFEVEQQ VNGIFLNFFG FNGTAGVWRI KALEDSGGWL ERTTVEDMDI AVRAHLNGWK FIFLNDVKVL CEVPESFEAY RKQQHRWHSG
401: PMHLFRVCLP AIIASKISIW KKANLVLLFF LLRKLILPFY SFTLFCVILP LSMFVPESEL PIWVICYIPV LMSLLNILPA PRSLPFIVPY LLFENTMSVT
501: KFNAMVVGLF QLGSSYEWIV TKKAGRSSES DLLMASERDS KPIHRGENQI YKKELALALL LLTAAFRSLL SAQGIHFYFL LFQGVSFLLV GLDLIGEQMS

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.