Factsheet for GSMUA_Achr7P19500_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P02100_001	Banana	plasma membrane	84.44	87.86
GSMUA_Achr4P05880_001	Banana	plasma membrane	80.88	83.17
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	83.79	82.06
Os09t0428000-00	Rice	cytosol, peroxisome	63.86	81.24
GSMUA_Achr7P19790_001	Banana	mitochondrion	17.99	81.02
GSMUA_Achr3P28000_001	Banana	plasma membrane	79.74	77.24
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	77.96	69.51
KRH44638	Soybean	cytosol	77.8	68.87
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	68.56	68.01
KXG35666	Sorghum	mitochondrion, plasma membrane	76.99	67.86
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	76.5	67.53
GSMUA_Achr7P00750_001	Banana	plasma membrane	68.07	67.31
GSMUA_Achr5P01920_001	Banana	plasma membrane	70.18	67.24
GSMUA_Achr4P32270_001	Banana	plasma membrane	69.37	67.08
GSMUA_Achr6P30200_001	Banana	cytosol	66.94	66.94
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	69.85	61.22
GSMUA_Achr6P27800_001	Banana	plasma membrane	62.88	60.06
GSMUA_Achr11P...	Banana	plasma membrane	33.55	47.37
GSMUA_Achr9P26980_001	Banana	plasma membrane	21.39	44.15
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	13.29	43.16
GSMUA_Achr6P07540_001	Banana	plasma membrane	36.63	42.8
GSMUA_Achr6P02600_001	Banana	extracellular, plasma membrane	33.23	42.09
GSMUA_AchrUn_...	Banana	plasma membrane	35.17	41.25
GSMUA_Achr10P...	Banana	plasma membrane	35.01	41.06
GSMUA_Achr10P...	Banana	plasma membrane	35.33	40.9
GSMUA_Achr6P13400_001	Banana	plasma membrane	35.82	40.77
GSMUA_Achr2P20260_001	Banana	plasma membrane	35.01	40.53
GSMUA_Achr7P21070_001	Banana	plasma membrane	32.58	37.78
GSMUA_Achr7P18150_001	Banana	plasma membrane	33.06	37.64
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	32.41	37.38
GSMUA_Achr5P15920_001	Banana	plasma membrane	34.85	35.83
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	35.49	32.44

Protein Annotations

EnsemblPlants:GSMUA_Achr7P19500_001	EnsemblPlants:GSMUA_Achr7T19500_001	EnsemblPlantsGene:GSMUA_Achr7G19500_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	ncoils:Coil	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7
PFAM:PF13641	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002968562	UniProt:M0TIY7
MapMan:21.2.1.1.1	:	:	:	:	:

Description

Probable xyloglucan glycosyltransferase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr7G19500_001]

Coordinates

chr7:-:22301517..22303946

Molecular Weight (calculated)

71325.3 Da

IEP (calculated)

8.226

GRAVY (calculated)

0.095

Length

617 amino acids

Sequence
(BLAST)

001: MAPRSDFSDW WVKDSRKGTP VVVTMENPNY SVLQIDGPDD EQESFRSMDK DRGKNAKQFT WVLLLKAHRA PRKARLLLKL LRMFLALSLI AFAFELVQGW
101: LHLAYLSWLS FRADYIAYPI QILSYICIIL FIIQSADRMI LCLGCFWIKL NKIKPRIDED PFKSGDGPEY QYPMVLVQIP MCNEREVYEQ SISAVCQIDW
201: PKDRLLVQVL DDSDDESIQF LIRAEVSKWS QRGVNIVYRH RMVRTGYKAG NLKSAMSCHY VRNYEFVAIF DADFQPDPDF LKLTIPHFKG NPELGLVQAR
301: WSFVNRDENL LTRLQYINLC FHFEVEQQVN GVFCNFFGFN GTAGVWRIKA LEESGGWLER TTVEDMDIAV RAHLKGWKFM FLNDVKVLCE IPESYEAYRK
401: QQHRWHSGPM QLFRLCLPDI IASKISIWKK ANLILLFFLL RKLILPFYSF TLFCVILPFS MFVPEAELPV WVICYVPVLM SILNILPALR SFPFIVPYLL
501: FENTMSVTKF NAMVSGLCQL GSSYEWVVTK KTGRSSESDL LEAAERELKE QEQRAAATPA VKKANKIYKK ELALALLLLV AAARSLLSAQ GIHFYFLLFQ
601: GVSFLLVGLD LIGEQIN

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.