Factsheet for GSMUA_Achr7P21070_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
nucleus 1
mitochondrion 1
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	54.32	66.13
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	22.74	63.68
GSMUA_Achr6P02600_001	Banana	extracellular, plasma membrane	58.27	63.66
GSMUA_Achr10P...	Banana	plasma membrane	59.4	59.29
GSMUA_Achr6P07540_001	Banana	plasma membrane	58.83	59.28
GSMUA_Achr10P...	Banana	plasma membrane	57.71	58.37
GSMUA_Achr9P26980_001	Banana	plasma membrane	32.71	58.19
GSMUA_Achr7P18150_001	Banana	plasma membrane	58.46	57.38
GSMUA_Achr2P20260_001	Banana	plasma membrane	57.33	57.22
GSMUA_Achr6P13400_001	Banana	plasma membrane	58.08	57.01
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	54.51	54.21
GSMUA_AchrUn_...	Banana	plasma membrane	52.07	52.66
GSMUA_Achr5P15920_001	Banana	plasma membrane	56.2	49.83
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	57.52	45.33
GSMUA_Achr7P19790_001	Banana	mitochondrion	10.9	42.34
GSMUA_Achr4P02100_001	Banana	plasma membrane	38.16	34.23
GSMUA_Achr4P05880_001	Banana	plasma membrane	37.59	33.33
GSMUA_Achr7P00750_001	Banana	plasma membrane	38.72	33.01
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	37.78	32.58
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	37.22	31.83
GSMUA_Achr4P32270_001	Banana	plasma membrane	38.16	31.82
GSMUA_Achr6P30200_001	Banana	cytosol	36.65	31.6
GSMUA_Achr6P27800_001	Banana	plasma membrane	38.35	31.58
GSMUA_Achr5P01920_001	Banana	plasma membrane	37.59	31.06
GSMUA_Achr3P28000_001	Banana	plasma membrane	37.03	30.93
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	36.28	30.63
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	38.16	28.84

Protein Annotations

EnsemblPlants:GSMUA_Achr7P21070_001	EnsemblPlants:GSMUA_Achr7T21070_001	EnsemblPlantsGene:GSMUA_Achr7G21070_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Glyco_trans_2-like	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21
PFAM:PF13632	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000295C9F8	UniProt:M0TJE4	MapMan:21.2.3.1.1.1

Description

Probable mannan synthase 9 [Source:GMGC_GENE;Acc:GSMUA_Achr7G21070_001]

Coordinates

chr7:+:23962026..23966140

Molecular Weight (calculated)

61114.0 Da

IEP (calculated)

9.016

GRAVY (calculated)

0.087

Length

532 amino acids

Sequence
(BLAST)

001: MSMMVLVEKV SMGLITLYAK VFRRRPARIY KCDPLTEDEE MGSLAFPMVL VQIPMYNEKE VYQLSIGAAC NMVWPSDRII IQVLDDSTDP LIKVLLCAAH
101: IQNGDSEVSR KVLTTTLGSK PSSFKNDCYH SSTSIWVSMS QELVKKECEM WSERGKNIRY ERRQNRNGYK AGALKVGMRY SYVESCEYIA MFDADFQPAP
201: DFLQRTVPFL VHNPKIALVQ SRWKFVNASE CLMTRMQEMS MNFHFKVEQE SGSTARAFFG YNGTAGVWRI RAIHEAGGWQ DRTTVEDMDL AVRAGLAGWK
301: FVYLGDVKVN SELPSTFKAY RYQQHRWSCG PANLFRKMFL KVLMAEGVAM SMKFYVIYNF FVARRIVSHF VTFSFYCVVI PLSVFFPEVI IPKWGLMYVP
401: TAITLINAVA TPSSVHLVIF WVLFENVMSL HRCKAVLIGL LETGRVNEWI VTEKLGDTLK TKSNTSATKR FRFKIKERFN LLEIMVGIYL LVCACYDYVY
501: RDDLYCIFIF PQSLAFMIMG FGYIGTIIPG DK

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.