Factsheet for GSMUA_Achr11P09120_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P02600_001	Banana	extracellular, plasma membrane	71.85	64.48
GSMUA_Achr9P26980_001	Banana	plasma membrane	42.56	62.21
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	84.21	54.52
GSMUA_Achr7P21070_001	Banana	plasma membrane	66.13	54.32
GSMUA_Achr6P07540_001	Banana	plasma membrane	64.99	53.79
GSMUA_Achr10P...	Banana	plasma membrane	65.22	53.47
GSMUA_Achr10P...	Banana	plasma membrane	64.3	53.42
GSMUA_Achr2P20260_001	Banana	plasma membrane	64.07	52.53
GSMUA_Achr6P13400_001	Banana	plasma membrane	63.84	51.48
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	62.24	50.84
GSMUA_Achr7P18150_001	Banana	plasma membrane	62.7	50.55
GSMUA_AchrUn_...	Banana	plasma membrane	58.35	48.48
GSMUA_Achr5P15920_001	Banana	plasma membrane	62.7	45.67
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	19.45	44.74
GSMUA_Achr7P19790_001	Banana	mitochondrion	13.96	44.53
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	47.37	33.55
GSMUA_Achr4P05880_001	Banana	plasma membrane	46.0	33.5
GSMUA_Achr4P02100_001	Banana	plasma membrane	45.31	33.39
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	46.68	32.8
GSMUA_Achr6P30200_001	Banana	cytosol	45.54	32.25
GSMUA_Achr7P00750_001	Banana	plasma membrane	45.54	31.89
GSMUA_Achr4P32270_001	Banana	plasma membrane	46.22	31.66
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	45.54	31.59
GSMUA_Achr6P27800_001	Banana	plasma membrane	46.45	31.42
GSMUA_Achr5P01920_001	Banana	plasma membrane	46.22	31.37
GSMUA_Achr3P28000_001	Banana	plasma membrane	45.31	31.08
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	45.54	28.27

Protein Annotations

EnsemblPlants:GSMUA_Achr11P09120_001	EnsemblPlants:GSMUA_Achr11T09120_001	EnsemblPlantsGene:GSMUA_Achr11G09120_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000295649B	UniProt:M0RQP2	MapMan:21.2.3.1.1.1

Description

Probable mannan synthase 9 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09120_001]

Coordinates

chr11:+:7050646..7055345

Molecular Weight (calculated)

50805.4 Da

IEP (calculated)

9.614

GRAVY (calculated)

0.111

Length

437 amino acids

Sequence
(BLAST)

001: MVLVQIPMFN EREVYQISIG AVCKLAWPHD RLIIQVLDDS TDLSIRELVQ EECQKWSNKG RRIHYISRDN RNGYKAGAMK EAMDLDYVKK CDYVAIFDAD
101: HEPPTDFLLR TIPFLMHNPD VALVQARWKF VNANECIMTR IQEMSLNYHF KMEQQSGSST MAFFGFNGTA GVWRIQAINE AEGWKERTTV EDMDLAVRAS
201: LQGWKFVYLG DLKVKSELPS SYKAYRYQQH RWSCGPANLF KKMTIDIIMA KKVSLLKKLF LLYNFFFARR IISHNVTFFF YCIIIPFSSF FPEVIIPKWG
301: VFYIPTVITI LNSIGTPRSL HLIIIWIFFE NVMSLHRCKA VFIGLFEAGR VNEWVVTEKL GKALKTKQVS TAAKRSSNKF WQRFLFLELG MAVALLICAC
401: YNFIYRSNQY FIFIFPLSLS FFLMGFGFVG THIPAAK

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.