Factsheet for GSMUA_Achr4P02100_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	87.86	84.44
GSMUA_Achr4P05880_001	Banana	plasma membrane	84.49	83.5
Os09t0428000-00	Rice	cytosol, peroxisome	67.45	82.47
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	85.16	80.16
GSMUA_Achr3P28000_001	Banana	plasma membrane	84.32	78.49
GSMUA_Achr7P19790_001	Banana	mitochondrion	17.88	77.37
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	81.96	69.53
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	81.11	69.51
KXG35666	Sorghum	mitochondrion, plasma membrane	81.28	68.86
KRH44638	Soybean	cytosol	80.61	68.58
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	71.5	68.17
GSMUA_Achr7P00750_001	Banana	plasma membrane	71.67	68.11
GSMUA_Achr4P32270_001	Banana	plasma membrane	73.02	67.87
GSMUA_Achr6P30200_001	Banana	cytosol	70.32	67.59
GSMUA_Achr5P01920_001	Banana	plasma membrane	73.02	67.24
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	72.85	61.36
GSMUA_Achr6P27800_001	Banana	plasma membrane	64.76	59.44
GSMUA_Achr11P...	Banana	plasma membrane	33.39	45.31
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	14.17	44.21
GSMUA_Achr9P26980_001	Banana	plasma membrane	21.42	42.47
GSMUA_Achr6P07540_001	Banana	plasma membrane	37.77	42.42
GSMUA_Achr10P...	Banana	plasma membrane	37.94	42.21
GSMUA_Achr10P...	Banana	plasma membrane	36.76	41.44
GSMUA_Achr6P02600_001	Banana	extracellular, plasma membrane	33.9	41.27
GSMUA_Achr6P13400_001	Banana	plasma membrane	37.44	40.96
GSMUA_AchrUn_...	Banana	plasma membrane	36.26	40.87
GSMUA_Achr2P20260_001	Banana	plasma membrane	36.59	40.71
GSMUA_Achr7P21070_001	Banana	plasma membrane	34.23	38.16
GSMUA_Achr7P18150_001	Banana	plasma membrane	34.06	37.27
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	33.05	36.64
GSMUA_Achr5P15920_001	Banana	plasma membrane	36.76	36.33
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	36.93	32.44

Protein Annotations

EnsemblPlants:GSMUA_Achr4P02100_001	EnsemblPlants:GSMUA_Achr4T02100_001	EnsemblPlantsGene:GSMUA_Achr4G02100_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Glyco_trans_2-like	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7
PFAM:PF13632	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00029636AD	UniProt:M0SKC7
MapMan:21.2.1.1.1	:	:	:	:	:

Description

Probable xyloglucan glycosyltransferase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G02100_001]

Coordinates

chr4:-:1887396..1890431

Molecular Weight (calculated)

68177.3 Da

IEP (calculated)

7.892

GRAVY (calculated)

0.115

Length

593 amino acids

Sequence
(BLAST)

001: MAPRLDFSGW WAKDKRKGTP VVVTMENPNY SVLEIDGPDA EAFPSMDKGR GKNAKQFTWV LLLKAHYAPD KGRLMLSLHI PEATEIHGWM HSAYLSWLSF
101: RADYIAYPIQ LLSYMCIILF VIQSADRLIL CLGCFWIKFK KIKPRVESDP FNSDDGSEYV YPMVLVQIPM CNEREVYEQS ISAACQIDWP KDRLLIQVLD
201: DSDDEAIQLL ISTEVSKWSQ RGVNIVYRHR LVRTGYKAGN LKSAMSCEYV RDYEFVAIFD ADFQPNPDFL KLTIPHFKGN PELGLVQARW SFVNKNENLL
301: TRLQNINLCF HFEVEQQVNG VFWNFFGFNG TAGVWRIKAL EDSGGWLERT TVEDMDIAVR AHLHGWKFIF LNDVKVLCEV PESYEAYRKQ QHRWHSGPMH
401: LFRLCLPAII TSKISIWKKA NLILLFFLLR KLILPFYSFT LFCVILPLTM FVPEAELPVW VICYVPVIMS FLNILPALRS FPFVVPYLLF ENTMSVTKFN
501: AMVSGLFKLG SSYEWVVTKK AGRSSESDLL TAAEREAKIA NKIYKKELAL SLLLLTAAAR SLLSAQGIHF YFLLFQGMSF LLVGLDLIGE QMS

Best Arabidopsis Sequence Match ( AT2G24630.2 )
(BLAST)

001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Arabidopsis Description

CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.