Factsheet for HORVU4Hr1G000610.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G532800.1	Wheat	plasma membrane	81.06	90.3
TraesCS2A01G530900.1	Wheat	golgi	80.72	89.75
TraesCS2B01G560100.1	Wheat	golgi	80.38	89.2
TraesCS1A01G010500.1	Wheat	extracellular, plasma membrane	64.16	88.47
TraesCS7D01G544700.1	Wheat	golgi	74.91	84.42
TraesCS7B01G494000.1	Wheat	golgi	74.57	83.4
Zm00001d043716_P001	Maize	mitochondrion, plasma membrane	65.7	71.69
Zm00001d043714_P001	Maize	cytosol	47.1	70.77
OQU89056	Sorghum	mitochondrion, plasma membrane	66.21	70.55
Zm00001d043719_P001	Maize	plasma membrane	23.21	69.04
Zm00001d005305_P001	Maize	plasma membrane	25.26	65.49
VIT_08s0040g01340.t01	Wine grape	extracellular, plasma membrane	51.37	62.71
PGSC0003DMT400009922	Potato	plasma membrane	25.6	61.73
HORVU7Hr1G092990.4	Barley	endoplasmic reticulum	49.83	61.22
GSMUA_AchrUn_...	Banana	plasma membrane	54.1	60.27
HORVU6Hr1G034630.10	Barley	plasma membrane	52.56	59.46
HORVU4Hr1G037380.1	Barley	cytosol, extracellular, mitochondrion, nucleus	9.9	58.0
KRH67729	Soybean	plasma membrane	51.88	57.69
HORVU7Hr1G092910.2	Barley	plasma membrane	50.51	57.48
KRG96022	Soybean	plasma membrane	51.54	57.2
HORVU6Hr1G018840.1	Barley	plastid	46.76	50.0
HORVU3Hr1G107340.2	Barley	plasma membrane	46.08	50.0
Os09t0572500-01	Rice	golgi, mitochondrion, plasma membrane, plastid	45.73	49.54
HORVU3Hr1G109930.14	Barley	plasma membrane	47.61	49.21
HORVU7Hr1G038440.1	Barley	cytosol, nucleus	46.93	48.33
HORVU3Hr1G002660.1	Barley	endoplasmic reticulum, plasma membrane	46.25	46.56
HORVU2Hr1G028380.1	Barley	golgi, plasma membrane	41.98	45.22
HORVU3Hr1G000340.2	Barley	plasma membrane	35.49	32.2
HORVU3Hr1G074570.1	Barley	plasma membrane	37.54	31.61
HORVU1Hr1G077230.2	Barley	plasma membrane	36.69	30.76
HORVU1Hr1G067470.1	Barley	plasma membrane	35.67	30.42

Protein Annotations

EnsemblPlants:HORVU4Hr1G000610.1	EnsemblPlantsGene:HORVU4Hr1G000610	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF28	PFAM:PF13641	SEG:seg
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000B46824C	UniProt:A0A287MW15	MapMan:21.2.3.1.1.1	:

Description

No Description!

Coordinates

chrchr4H:-:1094178..1096628

Molecular Weight (calculated)

66443.1 Da

IEP (calculated)

10.029

GRAVY (calculated)

0.034

Length

586 amino acids

Sequence
(BLAST)

001: GNSSVIHPPI QLNQLGLGGG RTIFFSFLFL FYSILFYSKR RRRRRRRKKM KGVSMVTMAR AAWAVVRYAV VVPLLQLSIY LCAAMSLMLF AERLYMGIIV
101: AVLWLNNRRR QRHCSRNQKN KDDDDIDDLE TGGADRPMVL IQIPMFNEKQ VYRLSIGAAC GLWWPSDKLV IQVLDDSTDA GIRSLVEAEC RRWAGKGVHI
201: RYENRSNRSG YKAGAMREGL KKTYAKDCEY VAVFDADFQP DADFLRRTVP LLQADPSVAL VQARWRFVNA DECILTRIQE MSLDYHFSVE QEVGSACHGF
301: FGFNGTAGVW RVHALADAGG WKDRTTVEDM DLAVRASMRG WKFVYAGDVQ VRNELPSSFK AYRYQQHRWS CGPANLMRKM FWEIVASRQV SAWKKLHVLY
401: GFFFVRKVVA HLVTFLFYCV VIPAYVLVGG QGQVRLPKYV AMYVPAIITL LNAVCTPRSW HLLVFWILFE NVMSMHRSKA TVIGLVEASR ANEWVVTEKL
501: GGSAAASATT TTMATNVNKQ AQAAMKKKKK SQSNSSGFLV PEMVMGLCLL YCAVYDIVFG HDHFYVYLLM QSAAAFVIGF GYVGSQ

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.