Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- golgi 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G163000.2 | Wheat | plasma membrane | 95.96 | 89.85 |
| TraesCS2B01G182700.3 | Wheat | plasma membrane | 95.22 | 89.16 |
| TraesCS2A01G157100.3 | Wheat | plasma membrane | 94.67 | 88.79 |
| EER97593 | Sorghum | plasma membrane | 81.25 | 77.14 |
| Zm00001d022230_P001 | Maize | vacuole | 80.88 | 76.79 |
| Os07t0630900-02 | Rice | plasma membrane | 79.78 | 74.19 |
| HORVU6Hr1G018840.1 | Barley | plastid | 54.96 | 54.56 |
| HORVU7Hr1G092990.4 | Barley | endoplasmic reticulum | 47.61 | 54.3 |
| HORVU4Hr1G037380.1 | Barley | cytosol, extracellular, mitochondrion, nucleus | 9.93 | 54.0 |
| HORVU7Hr1G092910.2 | Barley | plasma membrane | 51.1 | 53.98 |
| HORVU6Hr1G034630.10 | Barley | plasma membrane | 50.92 | 53.47 |
| HORVU7Hr1G038440.1 | Barley | cytosol, nucleus | 54.96 | 52.55 |
| HORVU3Hr1G109930.14 | Barley | plasma membrane | 50.18 | 48.15 |
| HORVU3Hr1G002660.1 | Barley | endoplasmic reticulum, plasma membrane | 48.9 | 45.7 |
| HORVU3Hr1G107340.2 | Barley | plasma membrane | 43.01 | 43.33 |
| HORVU4Hr1G000610.1 | Barley | endoplasmic reticulum, plasma membrane, plastid | 45.22 | 41.98 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 39.52 | 33.28 |
| HORVU1Hr1G077230.2 | Barley | plasma membrane | 41.18 | 32.05 |
| HORVU3Hr1G074570.1 | Barley | plasma membrane | 40.44 | 31.61 |
| HORVU1Hr1G067470.1 | Barley | plasma membrane | 39.52 | 31.3 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G028380.1 | EnsemblPlantsGene:HORVU2Hr1G028380 | Gene3D:3.90.550.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF12 | PFAM:PF13641 | SEG:seg |
| SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000B472AF8 | UniProt:A0A287HI81 | MapMan:21.2.3.1.1.1 | : |
Description
No Description!
Coordinates
chrchr2H:-:96162336..96166958
Molecular Weight (calculated)
61838.5 Da
IEP (calculated)
8.849
GRAVY (calculated)
0.182
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: AVGGRLDLQE AISWFVGVLD GSSSSGAGGV SLAEVYELWV RVRGRVIAPA LQVAVWACMV MSVMLVVEAL YNCVVSLGVK AVGWRPEWRF RWEPLAGGDE
101: EKGGAHYPMV LVQIPMYNEL EVYKLSIGAA CELQWPKDRI IVQVLDDSTD PFIKNLVELE CESWAVKGVN IKYTTRTSRK GFKAGALKKG MECDYAKQCE
201: YVAIFDADFQ PEADFLLRTV PFFVHNPQVA LVQARWSFVN DTMSLLTRVQ KMFFDYHFKV EQEAGSATFS FFSFNGTAGV WRTAAIKEAG GWKDRTTVED
301: MDLAVRATLK GWKFIYVGDI RVKSELPSTY KAYCRQQFRW SCGGAHLFRK VAKDILTAKD VSLVKKFHML YSFFLVRRVV APTVACILYN IIVPISVMIP
401: ELYLPVWGIA YIPTVLLVVT AIRHPKNIHI LPFWILFESV MTMHRMRAAL SGLFELSEFN EWVVTKKTGN NFENNEVPLL QKTRKRLRDR VNFREILFSA
501: FLFFCASYNL VFPGKTSYYF NLYLQGLAFV FLGLNFTGTC SCCQ
101: EKGGAHYPMV LVQIPMYNEL EVYKLSIGAA CELQWPKDRI IVQVLDDSTD PFIKNLVELE CESWAVKGVN IKYTTRTSRK GFKAGALKKG MECDYAKQCE
201: YVAIFDADFQ PEADFLLRTV PFFVHNPQVA LVQARWSFVN DTMSLLTRVQ KMFFDYHFKV EQEAGSATFS FFSFNGTAGV WRTAAIKEAG GWKDRTTVED
301: MDLAVRATLK GWKFIYVGDI RVKSELPSTY KAYCRQQFRW SCGGAHLFRK VAKDILTAKD VSLVKKFHML YSFFLVRRVV APTVACILYN IIVPISVMIP
401: ELYLPVWGIA YIPTVLLVVT AIRHPKNIHI LPFWILFESV MTMHRMRAAL SGLFELSEFN EWVVTKKTGN NFENNEVPLL QKTRKRLRDR VNFREILFSA
501: FLFFCASYNL VFPGKTSYYF NLYLQGLAFV FLGLNFTGTC SCCQ
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.