Factsheet for Zm00001d038676_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
nucleus 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22328	Sorghum	plasma membrane	91.6	92.25
Os05t0510800-01	Rice	plasma membrane	88.32	90.12
HORVU1Hr1G077230.2	Barley	plasma membrane	85.19	85.55
TraesCS1A01G331800.1	Wheat	plasma membrane	85.19	85.19
TraesCS1B01G345400.1	Wheat	plasma membrane	85.19	85.19
TraesCS1D01G334400.1	Wheat	plasma membrane	85.19	85.19
Zm00001d012666_P003	Maize	plasma membrane	83.48	85.17
Zm00001d043336_P001	Maize	plasma membrane	81.05	83.31
GSMUA_Achr7P00750_001	Banana	plasma membrane	68.66	77.24
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	68.09	76.85
GSMUA_Achr4P32270_001	Banana	plasma membrane	69.23	76.18
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	61.4	76.01
GSMUA_Achr5P01920_001	Banana	plasma membrane	69.09	75.31
GSMUA_Achr6P30200_001	Banana	cytosol	65.81	74.88
Zm00001d013168_P001	Maize	plasma membrane	72.22	73.91
Zm00001d034205_P001	Maize	plasma membrane	73.79	73.06
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	73.22	73.01
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.37	71.67
KRH15467	Soybean	plasma membrane	71.23	71.53
Bra000635.1-P	Field mustard	plasma membrane	69.94	70.95
CDX83148	Canola	plasma membrane	69.94	70.95
KRH61452	Soybean	plasma membrane	71.37	70.76
KRH52142	Soybean	plasma membrane	71.08	70.68
AT4G07960.1	Thale cress	plasma membrane	69.66	69.96
PGSC0003DMT400030125	Potato	plasma membrane	65.95	69.52
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.66	69.04
Solyc04g077470.2.1	Tomato	plasma membrane	70.37	66.58
PGSC0003DMT400012668	Potato	plasma membrane	70.09	66.31
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	64.81	65.09
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	62.82	58.26
Zm00001d049336_P001	Maize	plasma membrane	63.39	58.25
Zm00001d009569_P001	Maize	cytosol	7.83	50.93
Zm00001d010680_P002	Maize	cytosol	5.98	48.28
Zm00001d046681_P001	Maize	plasma membrane	31.48	42.02
Zm00001d032994_P002	Maize	plasma membrane	30.2	41.25
Zm00001d043714_P001	Maize	cytosol	22.65	40.77
Zm00001d037235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	31.34	40.74
Zm00001d053696_P003	Maize	plasma membrane	32.76	40.49
Zm00001d043716_P001	Maize	mitochondrion, plasma membrane	30.77	40.22
Zm00001d010955_P001	Maize	extracellular	10.26	38.92
Zm00001d048319_P003	Maize	plasma membrane	30.77	38.92
Zm00001d022230_P001	Maize	vacuole	31.34	38.39
Zm00001d018032_P001	Maize	plasma membrane	29.63	38.24
Zm00001d050406_P008	Maize	plasma membrane	30.63	38.19
Zm00001d032188_P001	Maize	plasma membrane	30.06	37.02
Zm00001d005305_P001	Maize	plasma membrane	10.11	31.42
Zm00001d043719_P001	Maize	plasma membrane	8.69	30.96

Protein Annotations

EntrezGene:103630593	MapMan:21.2.1.1.1	Gene3D:3.90.550.10	UniProt:A0A1D6M9Q6	ProteinID:AQK87533.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF13641	PANTHER:PTHR32044	PANTHER:PTHR32044:SF16	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI0004DEC7BF	EnsemblPlantsGene:Zm00001d038676	EnsemblPlants:Zm00001d038676_P001	EnsemblPlants:Zm00001d038676_T001	SEG:seg

Description

Probable xyloglucan glycosyltransferase 12

Coordinates

chr6:+:162387696..162391572

Molecular Weight (calculated)

78317.1 Da

IEP (calculated)

8.792

GRAVY (calculated)

0.061

Length

702 amino acids

Sequence
(BLAST)

001: MAPSWWGRDA RANGVVGGGT PVVVRMENPN WCISEVAAAA SEVDAPPPAA AGGGKAGRRG KNARQITWVL LLRAHRAAGR LTGAASAALS VAAAARRRVA
101: AGRTDSDADA DAAPGESAAL RARSYGCIRL FLALSLLLLA VEVAAYLRGW HLEVDVGAGI LAVDGLFAAA YAAWMRARLD YLAPPLQFLT NACVLLFLVQ
201: SVDRLVLCLG CFWIKLKGVR PVPPLPADKE DVEAGPDGVP MVLVQMPMCN EREVYQQSIG AVCSLDWPRS NFLVQVLDDS DDATTSALIK EEVEKWQREG
301: VRIVYRHRVI RDGYKAGNLK SAMNCSYVKD YEFVVIFDAD FQPQADFLKR TVPHFKGKDD VGLVQARWSF VNKDENLLTR LQNINLCFHF EVEQQVNGAF
401: LNFFGFNGTA GVWRIKALEE SGGWMERTTV EDMDIAVRAH LKGWKFLFLN DVECQCELPE SYEAYRKQQH RWHSGPMQLF RLCFVDIIKS KIGFWKKFNL
501: IFLFFLLRKL ILPFYSFTLF CVILPMTMFV PEAELPAWVV CYIPATMSIL NILPSPKSFP FIVPYLLFEN TMSVTKFNAM VSGLFQLGSA YEWVVTKKSG
601: RSSEGDLVAL VEKHSKQQRV GSAPNLDALT KESKGTEEEK NKKKRKKKHN RIYRKELALS FLLLTAAARS LLSAQGVHFY FLLFQGVSFL VVGLDLIGEQ
701: VD

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.