Factsheet for TraesCS7A01G394000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G389400.1	Wheat	plasma membrane	96.72	97.85
TraesCS7B01G296100.1	Wheat	mitochondrion, plasma membrane	95.17	94.99
TraesCS7A01G394100.1	Wheat	plasma membrane	94.59	94.59
HORVU7Hr1G092990.4	Barley	endoplasmic reticulum	81.66	88.68
TraesCS7A01G393800.1	Wheat	plasma membrane	81.27	81.75
Zm00001d046681_P001	Maize	plasma membrane	81.85	80.61
KXG20409	Sorghum	plasma membrane, plastid	81.47	78.73
PGSC0003DMT400060105	Potato	cytosol	63.9	76.62
Os06t0625700-01	Rice	plasma membrane	77.8	76.47
GSMUA_Achr6P07540_001	Banana	plasma membrane	76.25	74.81
TraesCS6A01G169200.1	Wheat	plasma membrane	73.75	73.75
Solyc05g055410.1.1	Tomato	plasma membrane	71.24	70.15
PGSC0003DMT400070323	Potato	plasma membrane, plastid	69.31	67.74
Solyc11g007600.1.1	Tomato	plasma membrane	68.34	66.92
TraesCS1A01G010500.1	Wheat	extracellular, plasma membrane	51.16	62.35
TraesCS2A01G530900.1	Wheat	golgi	61.39	60.34
TraesCS6A01G105800.1	Wheat	plasma membrane, plastid	60.42	59.28
TraesCS7A01G189100.2	Wheat	plasma membrane	62.93	59.17
TraesCS3A01G019200.1	Wheat	plasma membrane	61.0	56.03
TraesCS3A01G496400.1	Wheat	plasma membrane	61.97	56.02
TraesCS2A01G157100.3	Wheat	plasma membrane	54.83	48.97
TraesCS2A01G157200.2	Wheat	plasma membrane	52.9	47.32
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	43.82	32.9
TraesCS5A01G405700.1	Wheat	mitochondrion	44.02	32.43
TraesCS3A01G299500.1	Wheat	plasma membrane	43.82	32.24
TraesCS1A01G331800.1	Wheat	plasma membrane	43.05	31.77

Protein Annotations

EnsemblPlants:TraesCS7A01G394000.1	EnsemblPlantsGene:TraesCS7A01G394000	Gene3D:3.90.550.10	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044
PANTHER:PTHR32044:SF10	PFAM:PF13641	SEG:seg	SUPFAM:SSF53448	TIGR:cd06437	TMHMM:TMhelix
MapMan:21.2.3.1.1.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:572181209..572185594

Molecular Weight (calculated)

59125.8 Da

IEP (calculated)

9.213

GRAVY (calculated)

0.189

Length

518 amino acids

Sequence
(BLAST)

001: MSTLPGVWQI AAAWEQVRGP VIVPLLRASV LLCLAMSAML FAEKVYMAVV VLAVRLLGRR PERQWKWEPV GEDDPELGSA AYPMVLVQIP MYNEREVYQL
101: SIGAACGLSW PSDRIVVQVL DDSTDPVIKE LVQVECRRWA RKGVNIKYEI RDNRRGYKAG ALKEGMKHGY VKDCDLVAIF DADFQPEPDF LWRAVPFLVH
201: NPDIALVQAR WKFVNADECL MTRMQEMSLD YHFRVEQEVG SSTYAFFGFN GTAGVWRISA LNEAGGWKDR TTVEDMDLAV RASLKGWKFV YLGDLKVKNE
301: LPSTFKAFRY QQHRWSCGPA NLFRKMVMEI IRNKKVTLWK KIHVVYSFFL VRKVVAHIVT FVFYCLVIPA TVLVPEVEVP KWGCVYIPTI ITLLNAVGTP
401: RSVHLVVFWV LFENVMSLHR AKATFIGLLE AGTVNEWVVT EKLGDTLKAK MPSKALKKLR MRIGERLHLW ELGVAAYLFL CGCYDISFGN NRYFIFLFMQ
501: SIAFFIVGVG YVGTFVAQ

Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)

001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH

Arabidopsis Description

CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.