Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plasma membrane 4
- extracellular 6
- endoplasmic reticulum 4
- golgi 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G509900.1 | Wheat | endoplasmic reticulum, extracellular | 46.41 | 85.54 |
| TraesCS7B01G436600.1 | Wheat | extracellular | 51.63 | 76.7 |
| Os06t0643500-01 | Rice | extracellular | 51.31 | 61.57 |
| GSMUA_Achr3P00830_001 | Banana | endoplasmic reticulum, plasma membrane | 33.33 | 52.04 |
| GSMUA_Achr1P26060_001 | Banana | plastid | 37.25 | 51.35 |
| Zm00001d046596_P001 | Maize | extracellular | 50.0 | 50.33 |
| EER88705 | Sorghum | extracellular | 50.65 | 50.16 |
| HORVU7Hr1G115810.1 | Barley | plastid | 57.19 | 46.42 |
| TraesCS2A01G424800.1 | Wheat | extracellular | 24.18 | 45.12 |
| TraesCS7A01G024100.1 | Wheat | plastid | 20.91 | 42.95 |
| TraesCS7A01G024200.1 | Wheat | plastid | 25.16 | 34.68 |
| TraesCS2A01G518100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 28.1 | 29.45 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G520100.1 | EnsemblPlantsGene:TraesCS7A01G520100 | Gene3D:1.10.110.10 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Hydrophob_seed | PANTHER:PTHR31731 |
| PANTHER:PTHR31731:SF1 | PFAM:PF14547 | PRINTS:PR01217 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47699 |
| TIGR:cd01958 | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:704609409..704610329
Molecular Weight (calculated)
31075.5 Da
IEP (calculated)
9.632
GRAVY (calculated)
-0.004
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASRTKLRS LLLTFFLLIT TAIAAPTLAC DECHKPPKAP KPSHPPKAKA PAHPPKSRVP CPPVYGPPKG HLPRTPVVGP PKGNAPHTPT PVVGPPKGHV
101: PRPPVYSPPK GPITRPPVTA PPVVVGPPVT YPPITNPPPK GPTPRPPVTT PPVVVGPPVT YPAPPVIAPP VTTPPSPPAT TPTPPSPPVT APPSTPGNTP
201: PSSPGCGCGS QPPAPAPPAT QTCPVDTLKL GACVDLLGGL VHIGLGDPVV NQCCPLLEGL VELEAAVCLC TTIRLKLLNI NLALPLALQL LLTCGKTPPP
301: GFTCSI
101: PRPPVYSPPK GPITRPPVTA PPVVVGPPVT YPPITNPPPK GPTPRPPVTT PPVVVGPPVT YPAPPVIAPP VTTPPSPPAT TPTPPSPPVT APPSTPGNTP
201: PSSPGCGCGS QPPAPAPPAT QTCPVDTLKL GACVDLLGGL VHIGLGDPVV NQCCPLLEGL VELEAAVCLC TTIRLKLLNI NLALPLALQL LLTCGKTPPP
301: GFTCSI
001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
Arabidopsis Description
At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.