Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G391600.1 | Wheat | cytosol | 87.5 | 76.61 |
| EES04945 | Sorghum | cytosol | 39.46 | 38.33 |
| Os02t0288925-00 | Rice | cytosol | 37.01 | 35.61 |
| TraesCSU01G071400.2 | Wheat | cytosol | 43.14 | 21.81 |
Protein Annotations
| EnsemblPlants:TraesCSU01G034900.1 | EnsemblPlantsGene:TraesCSU01G034900 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrUn:+:30120512..30122624
Molecular Weight (calculated)
47022.4 Da
IEP (calculated)
7.902
GRAVY (calculated)
-0.119
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDADENEIP QPEEEKPCVD LELQRYTPTS MVAAVAKVLD DSDLLVEILL RVAFPTALVR AALVCRRWFH HASNSRFLRR FRKIHPPRLL GFYAFFERAR
101: FIPMQPQPPE LAVVVRHLAS CRFAYYINIE DCRNGNILTS GRRGGVWTYQ VYHLLCPERD MPIIPPLPCV ETGIYYILAE ILSREEGDGL SYFYLLVEPA
201: KETKKVMVRL YVLQDGAWCM LTLATNQLHC PRPRPKPVLV HNKIYMAAAQ SDDIIVLDLT DSSFSTIHLP QGVEYASSEI MLSRTDDASG VYLIHVRPKE
301: FQLCVWLHKG GQLAAGRYHI YLHEMRAILG KKDHPYVLIG KVGDDAQFVF LKVSRYIFYL DIKCRTLRKV YEETDDDRCY GGVHPIMMIW PPTFPALKDD
401: PKRNRSAM
101: FIPMQPQPPE LAVVVRHLAS CRFAYYINIE DCRNGNILTS GRRGGVWTYQ VYHLLCPERD MPIIPPLPCV ETGIYYILAE ILSREEGDGL SYFYLLVEPA
201: KETKKVMVRL YVLQDGAWCM LTLATNQLHC PRPRPKPVLV HNKIYMAAAQ SDDIIVLDLT DSSFSTIHLP QGVEYASSEI MLSRTDDASG VYLIHVRPKE
301: FQLCVWLHKG GQLAAGRYHI YLHEMRAILG KKDHPYVLIG KVGDDAQFVF LKVSRYIFYL DIKCRTLRKV YEETDDDRCY GGVHPIMMIW PPTFPALKDD
401: PKRNRSAM
001: MSDLPLDLVE EILSRVSATS LKRLRSTCKQ WNTLFKKRSF SQKHFHIAPK ESMVLMLKEY RVCSMNINLN VSPPSVEFQG TLGIKDDSHS NLGQVEIVEV
101: YHCDGLLLCA TRDNRLVVWN PCLGETRWIQ LKDECRRYST FALGYENNKF CRRNYKILRY WGWFHDHIPD DGGRFRFEIY DFRSDSWKVL DDVPDDRFPP
201: VSVVSLKGNT YWFGSNKKDF LRSFDFTTER FNHIGLPPSR DHGFMALSVV GEEQLSVLQE IETSKMEIFV TNKVGTEEAA LLWSKSFIVD LPIGGHCSEV
301: FASLLINEEK KVALCCNLDF ETDGNLIFTI GEDNKYYSEI PYATNKPWWL CRFSEKFTKK WWWFPFIYNY VPSLVQIL
101: YHCDGLLLCA TRDNRLVVWN PCLGETRWIQ LKDECRRYST FALGYENNKF CRRNYKILRY WGWFHDHIPD DGGRFRFEIY DFRSDSWKVL DDVPDDRFPP
201: VSVVSLKGNT YWFGSNKKDF LRSFDFTTER FNHIGLPPSR DHGFMALSVV GEEQLSVLQE IETSKMEIFV TNKVGTEEAA LLWSKSFIVD LPIGGHCSEV
301: FASLLINEEK KVALCCNLDF ETDGNLIFTI GEDNKYYSEI PYATNKPWWL CRFSEKFTKK WWWFPFIYNY VPSLVQIL
Arabidopsis Description
F-box and associated interaction domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J085]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.