Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- cytosol 2
- plastid 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 39.15 | 42.46 |
| Os02t0287800-00 | Rice | cytosol | 11.56 | 39.84 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 37.5 | 39.75 |
| TraesCS6A01G047800.1 | Wheat | cytosol | 37.5 | 39.65 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 37.5 | 39.55 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 36.79 | 39.0 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 36.08 | 38.73 |
| TraesCS3A01G456500.1 | Wheat | cytosol | 35.61 | 38.52 |
| HORVU6Hr1G016700.2 | Barley | cytosol, peroxisome, plastid | 36.79 | 38.33 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 38.21 | 38.3 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 13.44 | 38.26 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 32.78 | 38.08 |
| TraesCS1A01G393700.1 | Wheat | cytosol | 37.97 | 38.06 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 36.08 | 37.97 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 20.99 | 37.87 |
| HORVU7Hr1G095850.1 | Barley | cytosol | 33.96 | 37.7 |
| TraesCS3A01G428600.1 | Wheat | cytosol | 30.42 | 37.61 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 35.38 | 37.41 |
| TraesCS6A01G100400.1 | Wheat | cytosol | 38.21 | 37.24 |
| HORVU6Hr1G018030.1 | Barley | cytosol | 38.21 | 37.16 |
| EES04945 | Sorghum | cytosol | 36.79 | 37.14 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 36.32 | 37.02 |
| TraesCSU01G034900.1 | Wheat | cytosol | 35.61 | 37.01 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 35.14 | 36.97 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 35.38 | 36.85 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 35.38 | 36.85 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 32.31 | 36.83 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 29.95 | 36.6 |
| TraesCS6A01G010800.1 | Wheat | cytosol | 37.5 | 36.55 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 33.96 | 36.55 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 26.89 | 36.54 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 36.79 | 36.45 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 38.68 | 36.36 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 38.92 | 36.26 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 34.67 | 36.12 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 35.61 | 35.95 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 33.25 | 35.79 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 33.25 | 35.79 |
| TraesCS6A01G023800.1 | Wheat | cytosol | 33.02 | 35.71 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 38.92 | 35.71 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 21.23 | 35.57 |
| Os02t0294100-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 35.38 | 35.46 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 14.62 | 35.43 |
| TraesCS3A01G456400.1 | Wheat | cytosol | 19.58 | 35.32 |
| TraesCS6A01G023900.1 | Wheat | cytosol | 32.78 | 35.28 |
| TraesCS2A01G066000.1 | Wheat | cytosol | 36.32 | 35.24 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 26.18 | 35.24 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 34.43 | 35.1 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 36.32 | 35.08 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 32.55 | 35.03 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 35.14 | 34.98 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 37.74 | 34.86 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 36.56 | 34.75 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 35.14 | 34.73 |
| Os02t0287900-01 | Rice | cytosol | 34.43 | 34.6 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 22.88 | 34.4 |
| TraesCS3A01G109100.1 | Wheat | cytosol | 34.2 | 34.36 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 34.43 | 34.19 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 37.26 | 33.91 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 20.05 | 33.6 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 25.71 | 33.54 |
| HORVU6Hr1G004080.1 | Barley | cytosol | 20.52 | 33.21 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 18.4 | 32.77 |
| HORVU6Hr1G004190.1 | Barley | extracellular | 11.32 | 32.65 |
| TraesCS2A01G058400.1 | Wheat | cytosol | 28.54 | 32.18 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 19.34 | 31.42 |
| Os02t0288000-01 | Rice | cytosol | 29.95 | 30.83 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 19.81 | 30.43 |
| HORVU0Hr1G014790.1 | Barley | endoplasmic reticulum, plasma membrane | 36.08 | 23.79 |
| Os04t0313500-00 | Rice | cytosol | 27.83 | 21.93 |
| TraesCSU01G071400.2 | Wheat | cytosol | 36.32 | 19.08 |
| TraesCS6A01G100500.1 | Wheat | cytosol | 35.61 | 18.44 |
| HORVU6Hr1G002130.4 | Barley | plastid | 36.32 | 18.03 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 35.61 | 17.74 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 35.38 | 17.67 |
| HORVU5Hr1G114130.1 | Barley | cytosol, nucleus, plastid | 35.61 | 16.74 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 36.56 | 16.28 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.2 | ProteinID:BAD21729.1 | ProteinID:BAS78176.1 | InterPro:F-box-like_dom_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0031146 | EnsemblPlantsGene:Os02g0288925 | EnsemblPlants:Os02t0288925-00 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | UniProt:Q6K8A0 |
| SUPFAM:SSF81383 | UniParc:UPI0000377CB1 | SEG:seg | : | : | : |
Description
Os_F0610Hypothetical conserved gene. (Os02t0288925-00)
Coordinates
chr2:+:10922187..10923461
Molecular Weight (calculated)
47843.3 Da
IEP (calculated)
5.905
GRAVY (calculated)
-0.142
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQTNQAIEV DGDRLSPPPP AASPAVSAVL ENDDLVGEIL LRLAFPTTLV RAALACRRWL RVASDPSFLR RFRELHPPRL LGFYVTSLKI PRAHPLFVPM
101: PPPARPPELD PVVLRGGNFS LAYEGYTTSI YQCRNGSILL FKERHDRREL KYAVHRPLQH PERGLLAIPF SSTHDDDDDV EPDLGFDDEN VWGFHFGEDG
201: GSQLYRLSVM FTPRGATSAW FYAFRDGGWH VHTKATAQLP GLPPESAGFV VVRDKAYLAA TSSSVLVLDL KSSSLYTIQL PDGVEFPPVM MWYNDRSHDV
301: LFGRASDDSG VYIADLKEPQ LRIWLLKHGS TGWTLVDTIC LRSMCANLHI NCVGGDSRVV YMDYVGDDAE FLFLKTDECA LYLDVKSRQL HKVYEVTEKD
401: EILFSIMPFM MIWPPIFPVR KEIS
101: PPPARPPELD PVVLRGGNFS LAYEGYTTSI YQCRNGSILL FKERHDRREL KYAVHRPLQH PERGLLAIPF SSTHDDDDDV EPDLGFDDEN VWGFHFGEDG
201: GSQLYRLSVM FTPRGATSAW FYAFRDGGWH VHTKATAQLP GLPPESAGFV VVRDKAYLAA TSSSVLVLDL KSSSLYTIQL PDGVEFPPVM MWYNDRSHDV
301: LFGRASDDSG VYIADLKEPQ LRIWLLKHGS TGWTLVDTIC LRSMCANLHI NCVGGDSRVV YMDYVGDDAE FLFLKTDECA LYLDVKSRQL HKVYEVTEKD
401: EILFSIMPFM MIWPPIFPVR KEIS
001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
Arabidopsis Description
Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.