Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G449600.1 | Wheat | cytosol | 86.98 | 88.28 |
| TraesCS3A01G456500.1 | Wheat | cytosol | 84.77 | 88.01 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 74.45 | 76.71 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 68.06 | 68.06 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 63.88 | 62.5 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 63.15 | 61.19 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 52.33 | 57.26 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 46.44 | 47.25 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 50.12 | 45.23 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 44.47 | 44.91 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 43.73 | 42.79 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 43.98 | 42.32 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 26.78 | 41.76 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 41.03 | 41.44 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 39.8 | 41.12 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 31.7 | 40.95 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 25.31 | 40.71 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 45.95 | 40.13 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 38.82 | 40.1 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 14.5 | 39.6 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 41.52 | 39.49 |
| EES04945 | Sorghum | cytosol | 40.54 | 39.29 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 44.23 | 38.96 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 15.97 | 37.14 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 22.6 | 36.36 |
| Os02t0288925-00 | Rice | cytosol | 36.12 | 34.67 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 33.42 | 33.25 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 31.7 | 31.85 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 32.68 | 31.67 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 31.7 | 31.08 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 30.96 | 30.96 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 30.96 | 30.81 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 16.46 | 25.77 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 15.48 | 25.71 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 47.42 | 22.73 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 45.21 | 19.33 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G496700.1 | EnsemblPlantsGene:TraesCS3B01G496700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | PFAM:PF00646 | SEG:seg |
| SUPFAM:SSF81383 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:740051413..740054381
Molecular Weight (calculated)
46142.6 Da
IEP (calculated)
5.392
GRAVY (calculated)
-0.061
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGETQPPPD SMEGEARPPP ACVSKVLDDD DLLTEIIIRV GFPTSLVRAA CVCRRWLSHA SDRAFLRRFR ELHPPRLLGF YLAQGYPYDA ARFFPMLPQP
101: PELAAVIRRT NFSQRPFFSK EEGGTMVGCS NGRVITRRLN FSVLNNCVLA YELVFAVHSP LCYDYDHGMA ILPGLQLGMP CLYNWAQLFS KVERDGSSYF
201: YVTVEDTMEP KMNVYMWQAG DDAWHKHLTL GSDRLLHPQS TPKGVLVDNK IYFAADNAIV ILDLTSSILL TTQLPHGVDF DLGTTMLSRV NDGSGLYLIH
301: IKELQLHIWL HNGDNWLLVD TICLSETFAG LLEDELTVDI RINHVGDYNG FVFLEMGRSV LYLDVNRRTL CKAYEMTTEE KCLGDIYPFM MTWPPIFPTL
401: SPARNAT
101: PELAAVIRRT NFSQRPFFSK EEGGTMVGCS NGRVITRRLN FSVLNNCVLA YELVFAVHSP LCYDYDHGMA ILPGLQLGMP CLYNWAQLFS KVERDGSSYF
201: YVTVEDTMEP KMNVYMWQAG DDAWHKHLTL GSDRLLHPQS TPKGVLVDNK IYFAADNAIV ILDLTSSILL TTQLPHGVDF DLGTTMLSRV NDGSGLYLIH
301: IKELQLHIWL HNGDNWLLVD TICLSETFAG LLEDELTVDI RINHVGDYNG FVFLEMGRSV LYLDVNRRTL CKAYEMTTEE KCLGDIYPFM MTWPPIFPTL
401: SPARNAT
001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
Arabidopsis Description
Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.