Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G461700.1 | Wheat | cytosol | 93.49 | 93.27 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 94.7 | 88.71 |
| HORVU3Hr1G099010.2 | Barley | cytosol | 84.1 | 83.69 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 64.82 | 66.42 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 63.86 | 65.11 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 62.17 | 63.08 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 60.72 | 61.61 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 62.17 | 61.43 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 35.18 | 59.59 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 38.8 | 41.39 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 13.01 | 36.24 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 33.25 | 34.24 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 14.22 | 33.71 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 31.57 | 33.16 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 31.81 | 33.0 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 31.08 | 32.74 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 31.08 | 32.74 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 33.25 | 32.62 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 31.08 | 31.7 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 31.33 | 31.25 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 27.95 | 31.18 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 30.12 | 31.02 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 30.36 | 30.96 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 31.33 | 30.95 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 33.49 | 30.82 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 34.22 | 30.74 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 30.12 | 29.21 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 32.77 | 29.18 |
| Os04t0313500-00 | Rice | cytosol | 36.87 | 28.44 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 28.43 | 28.37 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 17.11 | 28.06 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 21.2 | 27.94 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 16.14 | 25.77 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 15.66 | 25.69 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 15.9 | 25.29 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 30.36 | 14.84 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 31.81 | 13.87 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G504300.1 | EnsemblPlantsGene:TraesCS3B01G504300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr3B:-:748776539..748779493
Molecular Weight (calculated)
45413.9 Da
IEP (calculated)
8.658
GRAVY (calculated)
0.049
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGDRRAPAA AAASAASVLG DDDLLREILI RLGFPNCLVR AALVSQRWLL HASDPAFLRR FRERNPPRVL GVCAGYSVRP FKFVPLPQPP ELAALSRRAA
101: SSCAYAFARG GQRIEHCRNG RLIVESLRKG TFKHSVLAPL LSGEPEAVLP PIPPPRRHPQ EPTQGAFTQI FLPEDGGRDG ITLVNLWKVR REVRAEVYVL
201: GAGGWGVPTT AMAEIELPYA ATFFAKMLPP VHGKVFVVTG FGYTLGLDLA AATFVMLQLP AGVQYNYMLS SAEGSGIYLV TADRFQLSVW LHQMTGDNHG
301: AGGWLLMDTF SVLEACARLA GDSWVPCEYL NVAAVGDNAD FVFLDHPSSG VIFSVHLNSR VVKKVYQRTA DEHECRSVAV RISPVMTIWP PIFPAPNIGH
401: DQEGIVRAVR SLDRR
101: SSCAYAFARG GQRIEHCRNG RLIVESLRKG TFKHSVLAPL LSGEPEAVLP PIPPPRRHPQ EPTQGAFTQI FLPEDGGRDG ITLVNLWKVR REVRAEVYVL
201: GAGGWGVPTT AMAEIELPYA ATFFAKMLPP VHGKVFVVTG FGYTLGLDLA AATFVMLQLP AGVQYNYMLS SAEGSGIYLV TADRFQLSVW LHQMTGDNHG
301: AGGWLLMDTF SVLEACARLA GDSWVPCEYL NVAAVGDNAD FVFLDHPSSG VIFSVHLNSR VVKKVYQRTA DEHECRSVAV RISPVMTIWP PIFPAPNIGH
401: DQEGIVRAVR SLDRR
001: MEQQKQKKRK VVSKSKRTQS KSASSLPLDL TSEILLRLPE KSIARFRCVS KLWLSITTDP YFINLFETRS PRPSLLVCFI ENDKLFVSSI PQHLHSLQNS
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ
Arabidopsis Description
Putative F-box protein At1g47765 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.