Factsheet for TraesCS3B01G506300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G457100.1	Wheat	cytosol	89.88	86.67
TraesCS3B01G505900.1	Wheat	cytosol	69.63	69.29
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	67.9	67.24
TraesCS3B01G504400.1	Wheat	cytosol	66.67	66.01
TraesCS3B01G504300.1	Wheat	cytosol	66.42	64.82
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	62.72	60.48
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	33.58	55.51
EES04961	Sorghum	cytosol, peroxisome, plastid	40.25	41.9
TraesCS6B01G120300.1	Wheat	cytosol	14.32	38.93
TraesCS6B01G120000.1	Wheat	cytosol	14.57	33.71
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	35.06	33.57
TraesCS6B01G032600.1	Wheat	cytosol	32.59	33.5
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	33.33	33.5
TraesCS6B01G032800.1	Wheat	cytosol	32.84	33.25
TraesCS6B01G032500.1	Wheat	cytosol	32.35	33.25
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	30.12	32.8
TraesCS3B01G497000.1	Wheat	cytosol	31.6	32.41
TraesCS3B01G496700.1	Wheat	cytosol	31.85	31.7
TraesCS3B01G466200.1	Wheat	cytosol	32.35	31.49
TraesCS3B01G496600.2	Wheat	cytosol	32.35	31.19
TraesCS6B01G095500.1	Wheat	cytosol	30.86	31.02
TraesCS3B01G496900.1	Wheat	cytosol	31.11	30.96
TraesCS6B01G128400.1	Wheat	cytosol	34.32	30.09
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	33.33	29.93
TraesCS6B01G017300.1	Wheat	cytosol	31.6	29.91
TraesCS6B01G128500.1	Wheat	cytosol	29.88	29.09
TraesCS4B01G391600.1	Wheat	cytosol	33.09	28.76
TraesCS1B01G083300.1	Wheat	cytosol	17.78	28.46
TraesCS6B01G019500.1	Wheat	cytosol	17.53	28.06
Os04t0313500-00	Rice	cytosol	37.04	27.88
TraesCS6B01G095400.1	Wheat	cytosol	20.99	26.98
TraesCS7B01G400700.1	Wheat	cytosol	16.79	26.15
TraesCS3B01G128100.1	Wheat	cytosol	15.8	24.52
TraesCS5B01G497300.1	Wheat	cytosol	31.11	14.84
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	32.59	13.87

Protein Annotations

EnsemblPlants:TraesCS3B01G506300.1	EnsemblPlantsGene:TraesCS3B01G506300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	PFAM:PF00646	SEG:seg
SUPFAM:SSF81383	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:749979341..749980558

Molecular Weight (calculated)

45025.1 Da

IEP (calculated)

6.187

GRAVY (calculated)

0.055

Length

405 amino acids

Sequence
(BLAST)

001: MDGDRRMPAV AAAAAAASTA SVLDDDDLLR EILLRLGFPT CLVRAALVSK RWLLHASDPA FLRRFRERNP PRLLDFCLGF SGRYRFVPFP PQPPELAAPI
101: RRATSSCAAA FARRILPIKH CRNGRLIIEF FNKGRFDYSL APLLAGEAAA VLPTTPLPHL DWDTTQDRFV EMFLPEDGGR NGITLLYLWA VRRKVYAELY
201: VLGSGGWGVP ATAAEIELSF DADFLEILPP IHGKVFVVTD SRYALGLDLA AASFFTLEFP VGVRHNYNLS CAEDSGLYLV SADGFQLSVW LHPMSGDGNG
301: AGWLLVDTFC VREAEACARL VRDRWIPPGN YLDVAAVGDN AEFVFLDHTA SGTLFYVHLR SRVVEKVHQR VPEKCYEPPQ IALSPTVMIW PPIFPAREVG
401: HDQEE

Best Arabidopsis Sequence Match ( AT1G47765.1 )
(BLAST)

001: MEQQKQKKRK VVSKSKRTQS KSASSLPLDL TSEILLRLPE KSIARFRCVS KLWLSITTDP YFINLFETRS PRPSLLVCFI ENDKLFVSSI PQHLHSLQNS
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ

Arabidopsis Description

Putative F-box protein At1g47765 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.