Factsheet for TraesCS3D01G457100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G506300.1	Wheat	cytosol	86.67	89.88
TraesCS3D01G457000.1	Wheat	plasma membrane	64.76	66.5
TraesCS3D01G455200.1	Wheat	cytosol	64.29	66.01
TraesCS3D01G456800.1	Wheat	cytosol	66.19	61.5
TraesCS3D01G456200.1	Wheat	cytosol	57.86	59.85
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	58.1	58.65
TraesCS3D01G455100.1	Wheat	cytosol	61.67	58.47
TraesCS3D01G456600.1	Wheat	cytosol	51.67	54.8
TraesCS3D01G456400.1	Wheat	cytosol, plastid	18.57	50.98
EES04961	Sorghum	cytosol, peroxisome, plastid	38.57	41.65
TraesCS5D01G363300.1	Wheat	cytosol, nucleus, peroxisome	32.86	35.29
TraesCS7D01G484000.1	Wheat	cytosol, peroxisome, plastid	33.81	34.89
TraesCS6D01G055300.1	Wheat	cytosol	33.33	34.83
TraesCS6D01G023200.1	Wheat	cytosol	32.38	34.0
TraesCS6D01G027300.1	Wheat	cytosol	29.05	33.42
TraesCS6D01G027100.1	Wheat	cytosol	31.19	33.25
TraesCS6D01G027200.1	Wheat	cytosol	30.48	32.49
TraesCS6D01G080600.1	Wheat	cytosol	18.33	32.35
TraesCS3D01G449600.1	Wheat	cytosol	30.71	32.17
TraesCS1D01G402800.1	Wheat	cytosol, nucleus, peroxisome	26.19	31.7
TraesCS3D01G449700.1	Wheat	cytosol	29.76	30.71
TraesCS3D01G110900.2	Wheat	cytosol	31.19	30.54
TraesCS3D01G449500.1	Wheat	cytosol	30.95	30.52
TraesCS6D01G027500.1	Wheat	cytosol	31.67	30.3
TraesCS1D01G065900.1	Wheat	cytosol	33.1	30.28
TraesCS7D01G483700.1	Wheat	cytosol, mitochondrion	31.67	29.75
TraesCS5D01G363100.1	Wheat	cytosol	31.9	29.45
TraesCS2D01G064400.1	Wheat	cytosol	30.24	28.48
TraesCS2D01G057400.2	Wheat	cytosol	28.81	28.34
Os04t0313500-00	Rice	cytosol	36.19	28.25
TraesCS5D01G497500.1	Wheat	cytosol	15.48	27.66
TraesCS6D01G044000.1	Wheat	cytosol	21.19	27.38
TraesCS6D01G069200.1	Wheat	cytosol	20.24	27.24
TraesCS6D01G080900.1	Wheat	cytosol	17.62	26.81
TraesCS7D01G484100.1	Wheat	cytosol	17.14	26.47
TraesCS3D01G449800.1	Wheat	cytosol, mitochondrion, plasma membrane	16.9	25.18
TraesCS6D01G082100.7	Wheat	cytosol	29.52	14.57

Protein Annotations

EnsemblPlants:TraesCS3D01G457100.1	EnsemblPlantsGene:TraesCS3D01G457100	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	PFAM:PF00646
SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3D:+:562545158..562546906

Molecular Weight (calculated)

47427.4 Da

IEP (calculated)

8.168

GRAVY (calculated)

0.112

Length

420 amino acids

Sequence
(BLAST)

001: MDGDRRTPAA AAASAASVLD DDELLREILL RLGFPTCLVR AALVSKRWLH HASDPAFLRR FRDRNPPRLL GFCLCFSGRY RFVPFPQPPE LAAPIRRATS
101: SCTAAFARRI LPIKHCRNGR LIIEFFNDGR FDYSLAPLLA GEPVAVLPTT PLPHLDWDTT QGRLVQMFLP EDGGRNGITL LYLWAVRRKV YAEVYVLGSG
201: GWGVPATATE IELSFDAHFL QILPPIHGKV FVMTDSRYAL GLDLAAASFF TLELPVGVRH NYKLSCAEDS RLYLVSADGF QLSVWLHLMS GDGNGAGWLL
301: VDTFCVREAE ACARLVRDRW IPPSNYLDVA AVGDNADFVF LDHTASGTLF YVHLRSRVVE KVHQRVPEKC YVPPQIALSP IVMIWPPVFP AREAWFFHPT
401: LIFSRKHTSI FLIWWWIPEW

Best Arabidopsis Sequence Match ( AT1G47765.1 )
(BLAST)

001: MEQQKQKKRK VVSKSKRTQS KSASSLPLDL TSEILLRLPE KSIARFRCVS KLWLSITTDP YFINLFETRS PRPSLLVCFI ENDKLFVSSI PQHLHSLQNS
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ

Arabidopsis Description

Putative F-box protein At1g47765 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.