Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G032800.1 | Wheat | cytosol | 95.25 | 95.25 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 96.5 | 87.93 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 52.25 | 51.99 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 49.0 | 50.13 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 29.25 | 49.79 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 48.75 | 49.49 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 45.0 | 49.32 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 48.5 | 49.24 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 48.5 | 48.38 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 48.75 | 47.91 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 50.75 | 47.65 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 51.25 | 45.05 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 47.5 | 44.29 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 47.25 | 44.26 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 30.75 | 43.62 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 37.75 | 43.52 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 33.5 | 42.95 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 49.25 | 42.92 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 32.75 | 40.31 |
| EES04945 | Sorghum | cytosol | 42.0 | 40.0 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 22.5 | 37.82 |
| Os02t0288925-00 | Rice | cytosol | 39.75 | 37.5 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 25.75 | 37.32 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 41.0 | 36.77 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 37.25 | 36.61 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 13.5 | 35.29 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 33.25 | 32.52 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 33.75 | 32.45 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 34.0 | 32.38 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 33.0 | 32.27 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 36.0 | 32.21 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 21.25 | 31.25 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 31.5 | 31.03 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 33.5 | 30.25 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 29.75 | 30.05 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 32.75 | 28.98 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 48.0 | 22.56 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G023200.1 | EnsemblPlantsGene:TraesCS6D01G023200 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6D:-:8835549..8837768
Molecular Weight (calculated)
45125.0 Da
IEP (calculated)
7.387
GRAVY (calculated)
-0.127
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGETPPATA AAVSKVLDDD NLLAEILIRV GLPTTLVRAA AVCRRWLHHA SDRKFLRRFR ELHPPRLLGL HVIEQGRFAW PTAERFVPML PLPPELDAVV
101: RRVSSSLGSY RRDDVRSTRV IGCRNGSLLI EHHMIEGSSR LGVHRLLFPE KGMTFVPARP RPKIHSSVHA YQEEILTKEG EGGLSYLYML VPYTREREDE
201: VQVYMLKDGV WCMHGNLTVD GKLKLSRPDE GPVLVDNKIY IAVDRSEITV LDLTSLSFSE IQLPQGVDRG GIGERSTSLA RADAAGVYLM HVKELQIRLW
301: LHKEGDWLLV DTICLREMLA SLRMLGSNAS LRIKSVGDNA EFVFLEMGRC ALHLDVKCRT LRKVYEVTEE GAYLGDIYPV MMIWPPAFPA LKDDPARDAM
101: RRVSSSLGSY RRDDVRSTRV IGCRNGSLLI EHHMIEGSSR LGVHRLLFPE KGMTFVPARP RPKIHSSVHA YQEEILTKEG EGGLSYLYML VPYTREREDE
201: VQVYMLKDGV WCMHGNLTVD GKLKLSRPDE GPVLVDNKIY IAVDRSEITV LDLTSLSFSE IQLPQGVDRG GIGERSTSLA RADAAGVYLM HVKELQIRLW
301: LHKEGDWLLV DTICLREMLA SLRMLGSNAS LRIKSVGDNA EFVFLEMGRC ALHLDVKCRT LRKVYEVTEE GAYLGDIYPV MMIWPPAFPA LKDDPARDAM
001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
Arabidopsis Description
Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.