Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 48.74 | 78.78 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 25.0 | 64.71 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 61.11 | 59.61 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 58.84 | 56.01 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 53.79 | 52.08 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 58.08 | 51.92 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 54.8 | 51.67 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 52.78 | 51.1 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 52.27 | 45.8 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 37.37 | 38.05 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 33.08 | 32.59 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 30.81 | 31.2 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 28.54 | 30.96 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 34.6 | 29.85 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 30.05 | 29.75 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 30.56 | 29.73 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 28.79 | 28.93 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 28.54 | 28.68 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 30.05 | 27.74 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 24.24 | 27.67 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 31.57 | 27.47 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 27.78 | 27.43 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 30.81 | 27.35 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 27.53 | 26.78 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 29.55 | 26.65 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 28.28 | 26.29 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 15.66 | 26.05 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 27.53 | 25.53 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 19.95 | 25.32 |
| Os04t0313500-00 | Rice | cytosol | 34.34 | 25.28 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 28.28 | 25.06 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 20.2 | 24.62 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 13.38 | 22.55 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 15.66 | 21.99 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 14.65 | 21.32 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 14.65 | 21.01 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 27.02 | 12.57 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G456600.1 | EnsemblPlantsGene:TraesCS3D01G456600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | PFAM:PF00646 | SEG:seg |
| SUPFAM:SSF81383 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:562459507..562461021
Molecular Weight (calculated)
44205.5 Da
IEP (calculated)
8.330
GRAVY (calculated)
0.062
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGDRPTPAA AAASVRSVLG DDDLFREILL RLGFPNCLVR ASLVSKRWLF HVSDPAFLCL FRERNPPRLL GFCVSNRSPQ CPWYEFVQLP QSPELAALVR
101: RGASSCNDAF RRSCQCQGIQ HVRNGRLIAW FSNDGRLKHS ILAPLLAGES EVVLPPTPPI SPPHREEPAL GVFSRIILPE DGSRGFITLE VPNAAAFLTK
201: MLPPVRGKVF MVTSFGCILG LDLAAARFLK LELPAQIGRN YMLSSAEGSG IYLVNADGFQ LSVWLHRMMS NSDGAGGWLL VDSFCVREAY SSAGHNWVWI
301: PQDGDFLGVA AVGDNAEFVF LDYVRYGVVL YVHLRSRVVE KVYEQAPYHH GFFRLGLSHI HVSPFMMIWP PVFPTLKRDT IKSNDPAVLW SLNYHR
101: RGASSCNDAF RRSCQCQGIQ HVRNGRLIAW FSNDGRLKHS ILAPLLAGES EVVLPPTPPI SPPHREEPAL GVFSRIILPE DGSRGFITLE VPNAAAFLTK
201: MLPPVRGKVF MVTSFGCILG LDLAAARFLK LELPAQIGRN YMLSSAEGSG IYLVNADGFQ LSVWLHRMMS NSDGAGGWLL VDSFCVREAY SSAGHNWVWI
301: PQDGDFLGVA AVGDNAEFVF LDYVRYGVVL YVHLRSRVVE KVYEQAPYHH GFFRLGLSHI HVSPFMMIWP PVFPTLKRDT IKSNDPAVLW SLNYHR
001: MEQQKQKKRK VVSKSKRTQS KSASSLPLDL TSEILLRLPE KSIARFRCVS KLWLSITTDP YFINLFETRS PRPSLLVCFI ENDKLFVSSI PQHLHSLQNS
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ
Arabidopsis Description
Putative F-box protein At1g47765 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.