Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G066000.1 | Wheat | cytosol | 81.84 | 83.52 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 39.24 | 43.53 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 38.12 | 43.48 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 22.2 | 41.6 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 33.86 | 41.37 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 36.77 | 41.0 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 36.55 | 40.65 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 35.87 | 40.61 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 35.43 | 40.1 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 31.17 | 40.06 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 36.55 | 40.05 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 37.89 | 39.58 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 20.4 | 38.72 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 36.77 | 38.5 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 26.68 | 38.14 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 36.55 | 38.0 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 13.0 | 37.91 |
| EES04945 | Sorghum | cytosol | 35.43 | 37.62 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 38.34 | 37.58 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 27.35 | 37.54 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 36.77 | 37.36 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 23.54 | 37.23 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 22.87 | 36.96 |
| Os02t0288925-00 | Rice | cytosol | 34.75 | 36.56 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 37.22 | 36.17 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 31.84 | 34.89 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 32.29 | 32.21 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 29.37 | 32.03 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 27.35 | 30.81 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 27.8 | 30.32 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 28.48 | 30.24 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 27.8 | 29.81 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 26.91 | 29.56 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 28.7 | 28.89 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 28.03 | 27.65 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 16.82 | 27.57 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 37.0 | 19.39 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G064400.1 | EnsemblPlantsGene:TraesCS2D01G064400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2D:-:27651658..27653733
Molecular Weight (calculated)
50687.5 Da
IEP (calculated)
6.067
GRAVY (calculated)
-0.142
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPADTPGGV DPFSKTSCMD GKMQRHSQFP PPLEAADSVS RVLDDDDLLI EIIVRLGLPT SLIRAILVCK RWFFIVSNKA FLRRFRSLHP PRLLGFYVST
101: RSTDELLPVL LRPCFVSMLP QPPELATAVR LAENYSLEAY DEELACILDC QNDTILLHGF QGKKILWGVH WPLCPERGVV EPPMAPYDQF DGASPAGTCA
201: QFLLKEEGDG KSLTFIWLSM AYLIEGKKYS IKYKANIYTL QDGLWHWRSS AAAVLPSPRS DLNPLLSGNK IYMEHSTSIA ALNLTTSNFT SIPLPEGMER
301: YICEDMMMSR ANDSGIYLIH LEILQLRIWL HRGDNSGSMR NWLLLDDICL REMLDALGMA GGEQPTLLNT SETGDNLQFV FLKMGQCALY LDIKHRELRK
401: VYEVTEDDRT LERIYPFMMT WPPTFPVLKN DPASPKRTFI RRTRTI
101: RSTDELLPVL LRPCFVSMLP QPPELATAVR LAENYSLEAY DEELACILDC QNDTILLHGF QGKKILWGVH WPLCPERGVV EPPMAPYDQF DGASPAGTCA
201: QFLLKEEGDG KSLTFIWLSM AYLIEGKKYS IKYKANIYTL QDGLWHWRSS AAAVLPSPRS DLNPLLSGNK IYMEHSTSIA ALNLTTSNFT SIPLPEGMER
301: YICEDMMMSR ANDSGIYLIH LEILQLRIWL HRGDNSGSMR NWLLLDDICL REMLDALGMA GGEQPTLLNT SETGDNLQFV FLKMGQCALY LDIKHRELRK
401: VYEVTEDDRT LERIYPFMMT WPPTFPVLKN DPASPKRTFI RRTRTI
001: MSSCSRTRTK APRSARSRRN GGFSSSSATI VADIDDVLIQ ILSFLPIKTL LRFKRVSKRW LSLITNPVFS NRVIKSNHPL PISGFFLHSP REIKYSFVSL
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
Arabidopsis Description
F-box protein At5g07610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLS0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.