Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G047800.1 | Wheat | cytosol | 89.8 | 90.02 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 56.22 | 57.8 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 51.99 | 52.25 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 55.97 | 49.45 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 44.28 | 48.77 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 46.77 | 47.72 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 47.51 | 46.93 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 27.36 | 46.81 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 46.52 | 46.63 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 45.52 | 46.45 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 35.82 | 46.15 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 50.25 | 46.01 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 48.76 | 46.01 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 38.81 | 44.96 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 50.75 | 44.44 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 47.26 | 44.29 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 46.27 | 43.56 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 30.35 | 43.26 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 33.33 | 41.23 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 15.17 | 39.87 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 23.38 | 39.5 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 43.53 | 39.24 |
| EES04945 | Sorghum | cytosol | 40.8 | 39.05 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 25.87 | 37.68 |
| Os02t0288925-00 | Rice | cytosol | 39.55 | 37.5 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 37.56 | 37.1 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 35.57 | 34.38 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 34.58 | 33.99 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 37.56 | 33.78 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 34.83 | 33.33 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 32.59 | 33.08 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 33.08 | 32.76 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 33.08 | 32.52 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 33.33 | 30.25 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 33.33 | 29.65 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 19.4 | 28.68 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 46.52 | 21.97 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G055300.1 | EnsemblPlantsGene:TraesCS6D01G055300 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 |
Description
No Description!
Coordinates
chr6D:+:26249724..26252207
Molecular Weight (calculated)
45428.3 Da
IEP (calculated)
7.537
GRAVY (calculated)
-0.080
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGERQPPPA AAAAVSKVLD DDDLLAEILL RVGLPTTLVR ASLVCKRWLA HASGRAFLRR FRKLHPPRLL GFYVEGDRDV PADPPAFVPV LPQPAELAAV
101: VRRASFSLDV YRVLLAQIHD CRNGSVFVQV GTEGRAVMRV HTPLCPQRRV AFIPPLPRPA LRPRGLCSFT QILSTEERGG LSYHYLYVES TVDKPETRLH
201: IYVLQDGLWL PRAPLDMHQL PRPLLQPKPV LVDTRIYMPA GLSDIIVLDL TASSFSTIQL PRGTKHDECG GTTMLARSYD ASGVYFVLVE EFQLLIWLHK
301: GGNWSLVDTI CLREMCPDFR TLGCTVEDED SDLIIRRAGN DAEFVLLQMG RCALHLDTRC RTLRKVYEQT EEHQCFGDIH PFMMIWHPTF PALRRDHARD
401: AM
101: VRRASFSLDV YRVLLAQIHD CRNGSVFVQV GTEGRAVMRV HTPLCPQRRV AFIPPLPRPA LRPRGLCSFT QILSTEERGG LSYHYLYVES TVDKPETRLH
201: IYVLQDGLWL PRAPLDMHQL PRPLLQPKPV LVDTRIYMPA GLSDIIVLDL TASSFSTIQL PRGTKHDECG GTTMLARSYD ASGVYFVLVE EFQLLIWLHK
301: GGNWSLVDTI CLREMCPDFR TLGCTVEDED SDLIIRRAGN DAEFVLLQMG RCALHLDTRC RTLRKVYEQT EEHQCFGDIH PFMMIWHPTF PALRRDHARD
401: AM
001: MSGKTSSRGQ QDEISGEKHE PTPTKEIKRR RKEFEKIHIP NEIVEEILVR LPVKSLTRFQ TVSKHWRTLI TSKYFGKRHM ALEKSKGCKL LFVCDDFVDR
101: AEDTLFLKTV ALEKTSVSEG DEQAFEFEGY KGFLDISESC DGLVCFYDTT RAVEVMNPAT TMFIELPLSR IQQLCIYKPN PEVELEPVQD PNPVLDPVMT
201: CSQIGVGKDS VSGSYKLVWM YNTSPATPPT CEVLDLDGKK WRFVNTTSLD HHQILCDQRP VFANGSLYWL TGDEEGYATT QTKLIVLDLH TEMFQVIQTP
301: PFITRDASGD KIGLCNLDGR LCISELKKDC KQEF
101: AEDTLFLKTV ALEKTSVSEG DEQAFEFEGY KGFLDISESC DGLVCFYDTT RAVEVMNPAT TMFIELPLSR IQQLCIYKPN PEVELEPVQD PNPVLDPVMT
201: CSQIGVGKDS VSGSYKLVWM YNTSPATPPT CEVLDLDGKK WRFVNTTSLD HHQILCDQRP VFANGSLYWL TGDEEGYATT QTKLIVLDLH TEMFQVIQTP
301: PFITRDASGD KIGLCNLDGR LCISELKKDC KQEF
Arabidopsis Description
Putative F-box protein At2g02030 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.