Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G363300.1 Wheat cytosol, nucleus, peroxisome 40.48 43.48
TraesCS3B01G497000.1 Wheat cytosol 40.0 42.53
TraesCS3A01G456500.1 Wheat cytosol 39.52 42.35
TraesCS3B01G497100.1 Wheat cytosol, nucleus, peroxisome 37.38 42.2
TraesCS4B01G392900.1 Wheat cytosol, peroxisome, plastid 40.48 42.18
TraesCS6D01G023200.1 Wheat cytosol 40.0 42.0
TraesCS1B01G083300.1 Wheat cytosol 25.24 41.9
HORVU7Hr1G095850.1 Barley cytosol 38.1 41.88
TraesCS1B01G423000.1 Wheat cytosol, nucleus, peroxisome 42.14 41.84
TraesCS1A01G393700.1 Wheat cytosol 42.14 41.84
TraesCS6B01G032800.1 Wheat cytosol 39.76 41.75
TraesCS3A01G109100.1 Wheat cytosol 41.9 41.71
TraesCS3D01G449600.1 Wheat cytosol 39.76 41.65
TraesCS3B01G496900.1 Wheat cytosol 40.24 41.52
TraesCS3D01G449700.1 Wheat cytosol 40.24 41.52
TraesCS6A01G100400.1 Wheat cytosol 42.86 41.38
TraesCS1D01G402800.1 Wheat cytosol, nucleus, peroxisome 34.05 41.21
TraesCS6A01G047800.1 Wheat cytosol 39.29 41.15
TraesCS6D01G027100.1 Wheat cytosol 38.57 41.12
TraesCS3A01G428600.1 Wheat cytosol 33.57 41.11
TraesCS6D01G027300.1 Wheat cytosol 35.71 41.1
TraesCS6D01G055300.1 Wheat cytosol 39.05 40.8
TraesCS6A01G023900.1 Wheat cytosol 38.1 40.61
HORVU6Hr1G018030.1 Barley cytosol 42.14 40.6
TraesCS3D01G110900.2 Wheat cytosol 41.43 40.56
HORVU6Hr1G016700.2 Barley cytosol, peroxisome, plastid 39.29 40.54
TraesCS3B01G496700.1 Wheat cytosol 39.29 40.54
TraesCS3B01G496600.2 Wheat cytosol 40.24 40.24
TraesCS3B01G466200.1 Wheat cytosol 39.76 40.14
TraesCS6B01G128400.1 Wheat cytosol 43.81 39.83
TraesCS6A01G023800.1 Wheat cytosol 37.14 39.8
TraesCS6D01G069200.1 Wheat cytosol 29.52 39.74
TraesCS6B01G032600.1 Wheat cytosol 37.14 39.59
TraesCS5D01G497500.1 Wheat cytosol 22.14 39.57
TraesCSU01G034900.1 Wheat cytosol 38.33 39.46
TraesCS3D01G449500.1 Wheat cytosol 40.0 39.44
TraesCS6B01G095500.1 Wheat cytosol 37.62 39.21
TraesCS6D01G027200.1 Wheat cytosol 36.67 39.09
TraesCS6B01G095400.1 Wheat cytosol 29.29 39.05
TraesCS6B01G017300.1 Wheat cytosol 39.52 38.78
TraesCS6B01G019500.1 Wheat cytosol 23.33 38.74
TraesCS6B01G032500.1 Wheat cytosol 36.19 38.58
TraesCS3A01G456400.1 Wheat cytosol 21.43 38.3
TraesCS6B01G120300.1 Wheat cytosol 13.57 38.26
TraesCS3D01G449800.1 Wheat cytosol, mitochondrion, plasma membrane 25.48 37.94
TraesCS6D01G080600.1 Wheat cytosol 21.43 37.82
TraesCS6A01G010800.1 Wheat cytosol 39.05 37.7
TraesCS6D01G027500.1 Wheat cytosol 39.29 37.59
TraesCS5B01G357900.1 Wheat cytosol, peroxisome, plastid 40.24 37.47
TraesCS2D01G057400.2 Wheat cytosol 38.1 37.47
TraesCS4B01G391600.1 Wheat cytosol 41.43 37.34
TraesCS2A01G058400.1 Wheat cytosol 33.33 37.23
TraesCS1D01G065900.1 Wheat cytosol 40.48 37.04
TraesCS6D01G044000.1 Wheat cytosol 28.57 36.92
Os02t0288925-00 Rice cytosol 37.14 36.79
TraesCS5D01G363100.1 Wheat cytosol 39.76 36.7
TraesCS6B01G120000.1 Wheat cytosol 15.24 36.57
TraesCS3B01G128100.1 Wheat cytosol 22.62 36.4
HORVU6Hr1G004080.1 Barley cytosol 22.38 35.88
TraesCS6D01G080900.1 Wheat cytosol 23.33 35.51
TraesCS2D01G064400.1 Wheat cytosol 37.62 35.43
HORVU6Hr1G004190.1 Barley extracellular 12.38 35.37
TraesCS6B01G128500.1 Wheat cytosol 35.0 35.34
TraesCS2A01G066000.1 Wheat cytosol 36.67 35.24
EES11456 Sorghum cytosol 33.57 35.07
KXG30069 Sorghum cytosol, peroxisome, plasma membrane 34.05 34.46
EES04961 Sorghum cytosol, peroxisome, plastid 30.95 33.42
EES06506 Sorghum cytosol 26.67 27.93
KXG29787 Sorghum cytosol 27.86 27.73
KXG29789 Sorghum cytosol 27.38 27.06
HORVU0Hr1G014790.1 Barley endoplasmic reticulum, plasma membrane 38.81 25.35
TraesCSU01G071400.2 Wheat cytosol 38.33 19.95
HORVU6Hr1G002130.4 Barley plastid 39.05 19.2
TraesCS6A01G100500.1 Wheat cytosol 36.43 18.68
TraesCS5B01G497300.1 Wheat cytosol 37.62 18.61
TraesCS6D01G082100.7 Wheat cytosol 35.95 17.74
HORVU5Hr1G114130.1 Barley cytosol, nucleus, plastid 37.86 17.63
TraesCS7B01G481600.2 Wheat cytosol, mitochondrion, nucleus, plastid 37.62 16.6
Protein Annotations
Gene3D:1.20.1280.50MapMan:35.2EntrezGene:8077749UniProt:C5Y070EnsemblPlants:EES04945ProteinID:EES04945
ProteinID:EES04945.1InterPro:F-box-like_dom_sfInterPro:F-box_domGO:GO:0003674GO:GO:0003824GO:GO:0004842
GO:GO:0005488GO:GO:0005515GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0031146InterPro:IPR001810
ProteinID:OQU84824.1PFAM:PF12937PANTHER:PTHR33207PANTHER:PTHR33207:SF22EnsemblPlantsGene:SORBI_3004G129500SUPFAM:SSF81383
unigene:Sbi.6149UniParc:UPI0001A853ABRefSeq:XP_002451969.1SEG:seg::
Description
hypothetical protein
Coordinates
chr4:+:16506022..16510351
Molecular Weight (calculated)
47412.0 Da
IEP (calculated)
6.088
GRAVY (calculated)
-0.075
Length
420 amino acids
Sequence
(BLAST)
001: MEEMRDMAQS TLAVASAAVI SLVLGDDNLL GEILLRLGFA TDLVRAAAVC RRWLRAASDP VFLRRFRDLH PPRLHGFYID SYPNPTLKRR FYAEFVPMQP
101: QPPELAAVLR RGRFSLDTYD SQSTRVLDCR NGRVIVSLFC GGDFKRGVHS PLHPARDLVI FPQLPKKDVP DSDSYSSKIR IFYEILSKES VDGLSYFAVS
201: LDYCVNEEKA TTCVYRLQDN AWRMQTSATT QISGLQGSSL KQLSIFLAED KIYMGITMHN ILVLDLTSST FSTIKFPDKM SFDGQIILSR ANGAGIYLSH
301: VKDLQLCIWL HMDCNGSIGD WLLVDTISLH DLCANLKISN SSTTEDGDDP DNGDDLDAYV HMVGGNAEYV FLEMDRYILY LDVRSRALHK VHTVTEKNTL
401: ISFIHPFMMT WPPVFPALQE
Best Arabidopsis Sequence Match ( AT3G16210.1 )
(BLAST)
001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
Arabidopsis Description
Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.