Factsheet for TraesCS6B01G128400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G100400.1	Wheat	cytosol	88.74	94.25
HORVU6Hr1G018030.1	Barley	cytosol	82.47	87.39
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	61.26	66.9
TraesCS1B01G083300.1	Wheat	cytosol	35.06	64.03
TraesCS6B01G095500.1	Wheat	cytosol	50.43	57.82
TraesCS6B01G095400.1	Wheat	cytosol	39.18	57.46
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	48.05	55.09
TraesCS6B01G019500.1	Wheat	cytosol	28.14	51.38
TraesCS6B01G032800.1	Wheat	cytosol	42.64	49.25
TraesCS3B01G128100.1	Wheat	cytosol	27.71	49.04
TraesCS4B01G391600.1	Wheat	cytosol	48.48	48.07
TraesCS6B01G017300.1	Wheat	cytosol	43.72	47.2
TraesCS3B01G497000.1	Wheat	cytosol	39.83	46.58
TraesCS6B01G120300.1	Wheat	cytosol	14.94	46.31
TraesCS6B01G032500.1	Wheat	cytosol	39.39	46.19
TraesCS6B01G032600.1	Wheat	cytosol	39.18	45.94
TraesCS3B01G466200.1	Wheat	cytosol	40.91	45.43
TraesCS6B01G120000.1	Wheat	cytosol	17.1	45.14
TraesCS3B01G496900.1	Wheat	cytosol	39.39	44.72
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	43.51	44.57
TraesCS3B01G496700.1	Wheat	cytosol	38.96	44.23
EES04945	Sorghum	cytosol	39.83	43.81
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	35.06	43.55
TraesCS3B01G496600.2	Wheat	cytosol	39.18	43.1
TraesCS6B01G128500.1	Wheat	cytosol	37.23	41.35
Os02t0288925-00	Rice	cytosol	35.71	38.92
TraesCS3B01G506300.1	Wheat	cytosol	30.09	34.32
TraesCS3B01G504300.1	Wheat	cytosol	30.74	34.22
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	30.95	34.05
TraesCS3B01G504400.1	Wheat	cytosol	29.87	33.74
TraesCS3B01G505900.1	Wheat	cytosol	29.65	33.66
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.44	33.25
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	16.02	30.2
TraesCS7B01G400700.1	Wheat	cytosol	16.23	28.85
TraesCS5B01G497300.1	Wheat	cytosol	38.96	21.2
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	40.91	19.85

Protein Annotations

EnsemblPlants:TraesCS6B01G128400.1	EnsemblPlantsGene:TraesCS6B01G128400	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	PFAM:PF12937
SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6B:+:123910941..123912993

Molecular Weight (calculated)

52762.2 Da

IEP (calculated)

7.472

GRAVY (calculated)

-0.091

Length

462 amino acids

Sequence
(BLAST)

001: MDAPEVVPQR VHPKKKPCVD GNQQQHSQSQ TSMGQCHTIS EVLNDDNLLI EILIRVGFPT TLVRAALVCK RWYHHASDRG FLCRFRKRNP PRLLGLYIDV
101: RWTWLGLYAT PRFVPMQPQA PELDTVVRRV ASHSFDAYGD GIWIMHCQNG SIFTRYRKGT EVTHGVYRPL CPERDMDFIP PLPTAQNHMQ KLLGAILSKE
201: EGDGLSYLYV LAECTTQTKT FKVRVYMLQG GVWCMHTSAT TQLPHMLPAL KAVLVDDKIY MADVFSNDII VLDLATSSFS RILLPQGVKY HTLHTILSRA
301: DDASGLYLIH VHVKEHQLCI WLHKGDNWLL VDTLCLHQMW ANLRMQDHTL EDEDISYAYI SQVGDNVQFV FLKTMCGRIL YLDVTSRTLH KVHGMTEKDR
401: HFSAIYPFMM IWPPIFPALK DDQARFSLWP LHDLCIALVE ASLFCAEISM LRAGELGGNG ST

Best Arabidopsis Sequence Match ( AT3G16210.1 )
(BLAST)

001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI

Arabidopsis Description

Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.