Factsheet for TraesCS3B01G466200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G428600.1	Wheat	cytosol	73.08	88.63
TraesCS3B01G496600.2	Wheat	cytosol	68.27	67.62
TraesCS3B01G496900.1	Wheat	cytosol	65.14	66.58
TraesCS3B01G497000.1	Wheat	cytosol	63.22	66.58
TraesCS3B01G496700.1	Wheat	cytosol	62.5	63.88
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	52.16	58.33
TraesCS6B01G032800.1	Wheat	cytosol	50.0	52.0
TraesCS3B01G128100.1	Wheat	cytosol	30.53	48.66
TraesCS6B01G128500.1	Wheat	cytosol	48.08	48.08
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	50.48	46.56
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	44.23	45.66
TraesCS6B01G095400.1	Wheat	cytosol	33.65	44.44
TraesCS6B01G032500.1	Wheat	cytosol	42.07	44.42
TraesCS1B01G083300.1	Wheat	cytosol	26.92	44.27
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	44.95	44.21
TraesCS6B01G032600.1	Wheat	cytosol	41.83	44.16
TraesCS6B01G095500.1	Wheat	cytosol	42.55	43.92
TraesCS6B01G019500.1	Wheat	cytosol	26.68	43.87
TraesCS6B01G017300.1	Wheat	cytosol	43.75	42.52
TraesCS6B01G120300.1	Wheat	cytosol	15.14	42.28
TraesCS6B01G128400.1	Wheat	cytosol	45.43	40.91
TraesCS4B01G391600.1	Wheat	cytosol	45.19	40.34
EES04945	Sorghum	cytosol	40.14	39.76
Os02t0288925-00	Rice	cytosol	37.02	36.32
TraesCS6B01G120000.1	Wheat	cytosol	15.14	36.0
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	32.93	32.62
TraesCS3B01G506300.1	Wheat	cytosol	31.49	32.35
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	31.49	32.03
TraesCS3B01G504400.1	Wheat	cytosol	31.25	31.78
TraesCS3B01G505900.1	Wheat	cytosol	31.01	31.7
TraesCS3B01G504300.1	Wheat	cytosol	31.25	31.33
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	18.27	31.02
TraesCS7B01G400700.1	Wheat	cytosol	18.75	30.0
TraesCS5B01G497300.1	Wheat	cytosol	48.8	23.91
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	49.76	21.74

Protein Annotations

EnsemblPlants:TraesCS3B01G466200.1	EnsemblPlantsGene:TraesCS3B01G466200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SUPFAM:SSF81383	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3B:+:708796705..708797955

Molecular Weight (calculated)

46969.4 Da

IEP (calculated)

4.877

GRAVY (calculated)

0.020

Length

416 amino acids

Sequence
(BLAST)

001: MEGETPPPPE LDGTEGEAQP PPACVSKVLD DENLLTEIIV RVGCPTSLVR AAGVCRLWLS HASDRAFLRR FRELHPPRLL GFYLEQREYP DAAARFFPML
101: PQPPGLDAVV RRASFSLDAY EGAQTDMAGC WNGSVLTSLH VYNFNHRRSE ITFVVHIPAL HHKSGEGNFC TFIQLFSKEE GAGVSYFYVR VECDRLQTYS
201: TVQVYVLQNG DHVWRTHLTL ASADVLLYPR SSPKGVLVGN KIYVPCDPDE IVVLDLTTSI LLTIQLPQGV GFGLAGNTML SRADDSSGVY LIHVKEFQLH
301: IWLLNGDSWL LVDTICLREM CANFLEDEPT ADIRINHVGD YNEFVFLEMC RCVLYLDIKC RTLRKVYEMT SEEQHLGDIY PFMMSWPPIF PALVDSPARF
401: VFCPFGDFYS VLVEVT

Best Arabidopsis Sequence Match ( AT3G52320.1 )
(BLAST)

001: MGSSLCVAVR KKEKQKQKKT VVFLPEIPEE MLIDILIRLP AKSLMRFKCV SKLWLSLITS RYFTNRFFKP SSPSCLFAYL VDRENQSKYL LLQSSSSSRH
101: DHSDTSVSVI DQHSTIPIMG GYLVNAARGL LCYRTGRRVK VCNPSTRQIV ELPIMRSKTN VWNWFGHDPF HDEYKVLSLF WEVTKEQTVV RSEHQVLVLG
201: VGASWRNTKS HHTPHRPFHP YSRGMTIDGV LYYSARTDAN RCVLMSFDLS SEEFNLIELP FENWSRTIHM NYQGKVATCQ YMRLASDGFV DVCVLEDADK
301: SQWSNKKTFV LPISQMNFVH GDRLVVGASR DSGKVLMRKA NLLRNQHARF FLYDMERNEI ARRIEIRPSL LGSFNKTNQF LKVCYTFQTK

Arabidopsis Description

Putative F-box protein At3g52320 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.