Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G095400.1 | Wheat | cytosol | 58.06 | 74.29 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 54.84 | 52.25 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 57.82 | 50.43 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 48.14 | 48.14 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 29.53 | 47.04 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 17.12 | 46.31 |
| TraesCS6A01G010800.1 | Wheat | cytosol | 49.63 | 45.98 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 19.6 | 45.14 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 42.68 | 43.54 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 45.66 | 42.99 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 43.92 | 42.55 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 48.39 | 41.85 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 41.19 | 41.5 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 38.21 | 41.4 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 41.69 | 41.28 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 41.44 | 41.03 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 45.91 | 41.02 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 39.95 | 40.86 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 42.43 | 40.71 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 25.06 | 39.92 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 38.96 | 39.85 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 25.81 | 39.85 |
| EES04945 | Sorghum | cytosol | 39.21 | 37.62 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 37.22 | 36.06 |
| Os02t0288925-00 | Rice | cytosol | 36.97 | 35.14 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 31.02 | 30.86 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 31.27 | 30.81 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 30.77 | 30.32 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 31.02 | 30.12 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 30.27 | 29.98 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 30.77 | 29.52 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 14.64 | 24.08 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 14.89 | 23.08 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 41.94 | 19.91 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 41.69 | 17.65 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G095500.1 | EnsemblPlantsGene:TraesCS6B01G095500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:Gal_Oxase/kelch_b-propeller | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SUPFAM:SSF50965 | SUPFAM:SSF81383 | MapMan:35.2 |
Description
No Description!
Coordinates
chr6B:-:71491120..71496826
Molecular Weight (calculated)
45878.8 Da
IEP (calculated)
7.856
GRAVY (calculated)
-0.054
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDTAVEVSR RVRPEKKLCA DADGETRQCP RTTTAAVDPV SKVLGDDNLL GEILLRVGFP TTLVRATLVR RGWYQLASDR GFLCRFRELH PPRLLGFYID
101: TGLVWPKSMA VLRFVPMLPQ PPEFAAVVRR MASHNFGTRE VPWIMDSRNG SIFTRHRERR ELSYGVYHPL CPERGIDDIP PLPSAQDRNR LNFGAILSKE
201: EGNGLSYFYV LTELTNQTEN FTLRVYMLQG SVWCLHTSAT AQLHLPLPKA KVVLVDNKIY MVVSPADDII VLDLTASSLS RIQHPPGVKY DCFHTFLSWA
301: DDPSGVYVIH VNGFKLCIWL HKGDNWLLVD TICLHEMCVN LRMLDNMLED EHSGHCYVCH AGDNAEFVVL QMCGCVFYLM SRTGHSVNWL RRIKITSLMS
401: IRL
101: TGLVWPKSMA VLRFVPMLPQ PPEFAAVVRR MASHNFGTRE VPWIMDSRNG SIFTRHRERR ELSYGVYHPL CPERGIDDIP PLPSAQDRNR LNFGAILSKE
201: EGNGLSYFYV LTELTNQTEN FTLRVYMLQG SVWCLHTSAT AQLHLPLPKA KVVLVDNKIY MVVSPADDII VLDLTASSLS RIQHPPGVKY DCFHTFLSWA
301: DDPSGVYVIH VNGFKLCIWL HKGDNWLLVD TICLHEMCVN LRMLDNMLED EHSGHCYVCH AGDNAEFVVL QMCGCVFYLM SRTGHSVNWL RRIKITSLMS
401: IRL
001: MESGTKKKKI DYYTEDLVVN ILARLPLKSI TAFTLVCKEW KSIVESQYLH ELFMSHHQDS HPSWSLMCRE THKEVIAHYR CDTWGLTQSL GSYISSFLTH
101: KFGIHKEKVT VEAYTDVGLI LVTDIYKPSG LATRIENGVV LGYKVVLMKD TTDTDDISLL IYSSETGLWS FNTVQSPYLL KRVAWFNPVS LNGNLYWLCY
201: NNYRDHLVVS HNLYATGTES DQCRVIEFPH LENDVYFRRA FTTSQGSLMY MKIINEEKDD GSLGLKLCVW RLKSGKWEIV SEISPACIKS GLDYFPLAIN
301: PFDANKMYLW SEMHKCLVST SLLKGKFRRH KKLEYSSDGR IMSFAGDWSP FEHLFNPCFS RFALPHWLHR IPSSPPTDKL RMRIRLRKRA T
101: KFGIHKEKVT VEAYTDVGLI LVTDIYKPSG LATRIENGVV LGYKVVLMKD TTDTDDISLL IYSSETGLWS FNTVQSPYLL KRVAWFNPVS LNGNLYWLCY
201: NNYRDHLVVS HNLYATGTES DQCRVIEFPH LENDVYFRRA FTTSQGSLMY MKIINEEKDD GSLGLKLCVW RLKSGKWEIV SEISPACIKS GLDYFPLAIN
301: PFDANKMYLW SEMHKCLVST SLLKGKFRRH KKLEYSSDGR IMSFAGDWSP FEHLFNPCFS RFALPHWLHR IPSSPPTDKL RMRIRLRKRA T
Arabidopsis Description
F-box family protein [Source:UniProtKB/TrEMBL;Acc:F4IZ09]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.