Factsheet for TraesCS6B01G128500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G128100.1	Wheat	cytosol	30.77	49.04
TraesCS3B01G466200.1	Wheat	cytosol	48.08	48.08
TraesCS3B01G496900.1	Wheat	cytosol	46.15	47.17
TraesCS3B01G496600.2	Wheat	cytosol	47.6	47.14
TraesCS6B01G032800.1	Wheat	cytosol	45.19	47.0
HORVU0Hr1G014790.1	Barley	endoplasmic reticulum, plasma membrane	71.15	46.03
TraesCS6A01G100500.1	Wheat	cytosol	90.62	46.03
TraesCS3B01G497000.1	Wheat	cytosol	43.27	45.57
TraesCS6D01G082100.7	Wheat	cytosol	91.11	44.54
TraesCS6B01G019500.1	Wheat	cytosol	26.68	43.87
TraesCS3B01G496700.1	Wheat	cytosol	42.79	43.73
TraesCS6B01G032600.1	Wheat	cytosol	41.11	43.4
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	38.7	43.28
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	41.59	42.93
TraesCS6B01G032500.1	Wheat	cytosol	40.62	42.89
TraesCS6B01G017300.1	Wheat	cytosol	43.27	42.06
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	45.43	41.91
TraesCS1B01G083300.1	Wheat	cytosol	25.0	41.11
TraesCS6B01G095400.1	Wheat	cytosol	29.81	39.37
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	39.9	39.24
TraesCS4B01G391600.1	Wheat	cytosol	42.79	38.2
TraesCS6B01G128400.1	Wheat	cytosol	41.35	37.23
TraesCS6B01G095500.1	Wheat	cytosol	36.06	37.22
TraesCSU01G071400.2	Wheat	cytosol	68.75	35.44
EES04945	Sorghum	cytosol	35.34	35.0
Os02t0288925-00	Rice	cytosol	35.1	34.43
HORVU6Hr1G002130.4	Barley	plastid	70.43	34.31
TraesCS6B01G120000.1	Wheat	cytosol	14.42	34.29
TraesCS5B01G497300.1	Wheat	cytosol	68.03	33.33
TraesCS6B01G120300.1	Wheat	cytosol	11.78	32.89
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.57	30.07
TraesCS3B01G506300.1	Wheat	cytosol	29.09	29.88
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	67.07	29.31
TraesCS7B01G400700.1	Wheat	cytosol	18.27	29.23
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	29.09	28.81
TraesCS3B01G505900.1	Wheat	cytosol	27.88	28.5
TraesCS3B01G504300.1	Wheat	cytosol	28.37	28.43
TraesCS3B01G504400.1	Wheat	cytosol	27.4	27.87
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	15.14	25.71

Protein Annotations

EnsemblPlants:TraesCS6B01G128500.1	EnsemblPlantsGene:TraesCS6B01G128500	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	PFAM:PF00646
SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6B:+:124083605..124085613

Molecular Weight (calculated)

47882.0 Da

IEP (calculated)

6.863

GRAVY (calculated)

-0.082

Length

416 amino acids

Sequence
(BLAST)

001: MLETDQASKV SKVLDDDDLL REIIIRVGFP TTLVRAALVC KRWYHHASEP AFLRHFCERH LSCLLGFYVE DREDHKMASI RFFSLLNKPR ELAAIVRSLL
101: GYSWDAYRSA PANFLCSRNG RVFISLYDQV NRSKFTVGAH SPLCPERGLT VVPPFPHIEI QDGYSRTMND LFSVDEVNDL SLLHVLVVSN MQRTKSTVHV
201: HMWRHGDGVW RTYLTLDTDQ LLDPRREPKS VLANNKIYIA SAQSDIVVFD LIASSISMFQ LPQGVEYGDT DTMLAQAQDA SGVYLIHAKK LQLHIWLHKG
301: DNWLLVDTIC LREMVANMWI PGYRVEDDSY APLRIKHVGD HAEFMFLEMG RCALQLDVKC MQLRKVYVMA EEEVRLGDIH PLKMIWPPIF PALKDNPARF
401: AFWPSDDLYI AFVRVT

Best Arabidopsis Sequence Match ( AT2G39940.1 )
(BLAST)

001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI

Arabidopsis Description

COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.