Factsheet for TraesCS1B01G423000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G393700.1	Wheat	cytosol	93.85	93.85
TraesCS1D01G402800.1	Wheat	cytosol, nucleus, peroxisome	75.65	92.22
TraesCS1B01G083300.1	Wheat	cytosol	37.59	62.85
TraesCS6B01G128400.1	Wheat	cytosol	66.9	61.26
TraesCS6B01G095500.1	Wheat	cytosol	52.25	54.84
TraesCS6B01G095400.1	Wheat	cytosol	40.66	54.6
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	50.12	52.61
TraesCS6B01G032800.1	Wheat	cytosol	46.57	49.25
TraesCS6B01G017300.1	Wheat	cytosol	49.17	48.6
TraesCS6B01G032500.1	Wheat	cytosol	44.21	47.46
TraesCS6B01G019500.1	Wheat	cytosol	28.37	47.43
TraesCS3B01G128100.1	Wheat	cytosol	29.08	47.13
TraesCS6B01G120300.1	Wheat	cytosol	16.55	46.98
TraesCS6B01G032600.1	Wheat	cytosol	43.74	46.95
TraesCS4B01G391600.1	Wheat	cytosol	51.54	46.78
TraesCS3B01G497000.1	Wheat	cytosol	42.79	45.82
TraesCS6B01G120000.1	Wheat	cytosol	18.91	45.71
TraesCS3B01G466200.1	Wheat	cytosol	44.21	44.95
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	47.75	44.79
TraesCS3B01G496900.1	Wheat	cytosol	42.55	44.23
TraesCS3B01G496700.1	Wheat	cytosol	42.32	43.98
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	37.83	43.01
TraesCS3B01G496600.2	Wheat	cytosol	42.55	42.86
EES04945	Sorghum	cytosol	41.84	42.14
TraesCS6B01G128500.1	Wheat	cytosol	39.24	39.9
Os02t0288925-00	Rice	cytosol	38.3	38.21
TraesCS3B01G506300.1	Wheat	cytosol	33.57	35.06
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.86	33.99
TraesCS3B01G504400.1	Wheat	cytosol	32.39	33.5
TraesCS3B01G505900.1	Wheat	cytosol	32.15	33.42
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	33.1	33.33
TraesCS3B01G504300.1	Wheat	cytosol	32.62	33.25
TraesCS7B01G400700.1	Wheat	cytosol	17.02	27.69
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	15.6	26.94
TraesCS5B01G497300.1	Wheat	cytosol	43.03	21.44
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	45.15	20.06

Protein Annotations

EnsemblPlants:TraesCS1B01G423000.1	EnsemblPlantsGene:TraesCS1B01G423000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	TMHMM:TMhelix	MapMan:35.2

Description

No Description!

Coordinates

chr1B:+:645707170..645709422

Molecular Weight (calculated)

48219.0 Da

IEP (calculated)

7.484

GRAVY (calculated)

0.002

Length

423 amino acids

Sequence
(BLAST)

001: MDASEEISQR LRPEKKPCAD GESQQHSPPA SMVPVSKVLD DDNLLIEILL RVSFPTTLVC AALVCKRWLC HASDPKFLSL FRKRHPPRLL GFYIYMGSAW
101: LWLGAPLLFV PMQPQPPELA PFISRVASHS FGADNDRLCI MDCRNGSVLI RCRRGKILTH GVHRPLCAQR GMDDIPPLPR AQYHGQQIFN TILSKEEGGV
201: LSYLYMLAEF FRKTKSFRVR VYTLQGGLWC MHASATTQLP RLLTSLEVVL IDDKIYMADT FSDEIIVLDM TTSGFSTIRL PQGVIFHCVR TIMSRAGDAS
301: AVYLTHIHVK ELQLCIWLHK GDNWLLVDTI CLHQMWDNLR MLDQTLEDEH ISFTCISNVG DNAEFVFLEM CGCIFYLDVN SKTLRKVHGV TVKDRQFNDV
401: YPFMMIWPPI FPAPKDDPAR NAM

Best Arabidopsis Sequence Match ( AT1G46984.1 )
(BLAST)

001: MNRRKNDFLV RPKRIRCYTQ LSTLPIDLII EILSRLPMNS IAICRLVSKQ WASILQSSDF TESFLIKSPP RPRLLFTIRY GSKWHLFSAP QPRNFDENFP
101: VVATDYHKGF SGNWCMQSFQ LVNGFIYLNN RLSLKGKIDR VSVIWNPSTG QQIPLPDLGV KNSHSKSFFG YDPIEKQFKV LCITSSKEHQ VLTLGTGRKL
201: SWRKIEYSYP HYPRKKSNGI CINGVLYYRN TNAMIVRFDV RSEEFRFVEI KMYVEILSLI NYKGKLGVLF PNTDLAQLWV LDDTNKVEWS KHNFVFPDTT
301: FEAIRATDTG EMFCASSCWR DSLYVSYYDL EKESVKKVKI KGIEDKLSIG KHHANEFFIF PNHVENVMVL

Arabidopsis Description

Putative F-box protein At1g46984 [Source:UniProtKB/Swiss-Prot;Acc:Q9C627]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.