Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G393700.1 | Wheat | cytosol | 92.51 | 75.89 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 92.22 | 75.65 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 61.1 | 46.19 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 39.77 | 44.23 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 28.53 | 41.6 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 46.4 | 41.18 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 37.18 | 39.69 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 44.96 | 38.81 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 46.69 | 37.76 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 43.52 | 37.75 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 42.65 | 36.91 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 40.92 | 36.04 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 44.09 | 35.83 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 37.46 | 35.62 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 40.35 | 35.53 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 46.4 | 35.38 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 15.56 | 35.29 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 40.92 | 34.89 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 43.8 | 34.62 |
| EES04945 | Sorghum | cytosol | 41.21 | 34.05 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 27.09 | 33.33 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 40.92 | 33.33 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 40.06 | 31.17 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 24.21 | 30.43 |
| Os02t0288925-00 | Rice | cytosol | 36.6 | 29.95 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 20.17 | 29.79 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 32.28 | 27.52 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 32.56 | 27.16 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 31.7 | 26.89 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 31.12 | 26.6 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 31.7 | 26.19 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 32.85 | 25.73 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 33.14 | 25.73 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 30.26 | 25.67 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 27.67 | 24.24 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 30.26 | 23.23 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 16.43 | 20.96 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 39.77 | 16.22 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G402800.1 | EnsemblPlantsGene:TraesCS1D01G402800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SUPFAM:SSF81383 | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1D:+:467801050..467802277
Molecular Weight (calculated)
39332.3 Da
IEP (calculated)
7.303
GRAVY (calculated)
0.115
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDASEEISQ RLRPEKKPCA DGESQQHLPA SMVLDDDNLL IEILSFPTTL VCATLVCKRW LCHASDPKFL SLFRKRHPPR VLGFYIYGGS AWIWLGAPLL
101: FVPMQPQPPE LAPFISRVAS HSFGADNDRL CIMDCRNGSV LTRCRRGTIL THGVHRPLCP QRDMDVIPPL PRAQYHGQQI FNTILSKEEG GVLSYLYMLA
201: EFFSKTKSFR VRVYMLQGGV WCMHASATTQ LPRLLTSLAV VLVDDKIYMA DTFSDEIIVL DMTTSGFSTI LLPQGVNFHC VRTIMSRAGD ASGVYLTHIH
301: VKELQLCIWL HKGDNWLLVD TICLHQMWDN LMMLDQTLRM SILVLIV
101: FVPMQPQPPE LAPFISRVAS HSFGADNDRL CIMDCRNGSV LTRCRRGTIL THGVHRPLCP QRDMDVIPPL PRAQYHGQQI FNTILSKEEG GVLSYLYMLA
201: EFFSKTKSFR VRVYMLQGGV WCMHASATTQ LPRLLTSLAV VLVDDKIYMA DTFSDEIIVL DMTTSGFSTI LLPQGVNFHC VRTIMSRAGD ASGVYLTHIH
301: VKELQLCIWL HKGDNWLLVD TICLHQMWDN LMMLDQTLRM SILVLIV
001: MSSCSRTRTK APRSARSRRN GGFSSSSATI VADIDDVLIQ ILSFLPIKTL LRFKRVSKRW LSLITNPVFS NRVIKSNHPL PISGFFLHSP REIKYSFVSL
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
Arabidopsis Description
F-box protein At5g07610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLS0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.