Factsheet for TraesCS3D01G449800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G497000.1	Wheat	cytosol	93.26	66.58
TraesCS3D01G449600.1	Wheat	cytosol	74.82	52.62
TraesCS5D01G497500.1	Wheat	cytosol	42.91	51.49
TraesCS3D01G449700.1	Wheat	cytosol	72.69	50.37
TraesCS6D01G069200.1	Wheat	cytosol	46.45	41.99
TraesCS3D01G449500.1	Wheat	cytosol	62.06	41.08
TraesCS6D01G044000.1	Wheat	cytosol	42.2	36.62
TraesCS6D01G080900.1	Wheat	cytosol	34.4	35.14
TraesCS5D01G363300.1	Wheat	cytosol, nucleus, peroxisome	46.1	33.25
TraesCS2D01G057400.2	Wheat	cytosol	48.94	32.32
TraesCS6D01G023200.1	Wheat	cytosol	43.62	30.75
TraesCS3D01G110900.2	Wheat	cytosol	46.45	30.54
TraesCS6D01G055300.1	Wheat	cytosol	43.26	30.35
TraesCS6D01G027300.1	Wheat	cytosol	38.3	29.59
TraesCS5D01G363100.1	Wheat	cytosol	47.16	29.23
TraesCS6D01G027100.1	Wheat	cytosol	40.07	28.68
TraesCS7D01G484100.1	Wheat	cytosol	27.3	28.31
TraesCS6D01G027200.1	Wheat	cytosol	39.36	28.17
TraesCS1D01G402800.1	Wheat	cytosol, nucleus, peroxisome	33.33	27.09
TraesCS6D01G027500.1	Wheat	cytosol	41.84	26.88
TraesCS1D01G065900.1	Wheat	cytosol	43.62	26.8
EES04945	Sorghum	cytosol	37.94	25.48
TraesCS2D01G064400.1	Wheat	cytosol	37.23	23.54
Os02t0288925-00	Rice	cytosol	34.4	22.88
TraesCS7D01G484000.1	Wheat	cytosol, peroxisome, plastid	28.72	19.9
TraesCS3D01G455200.1	Wheat	cytosol	26.95	18.58
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	26.95	18.27
TraesCS7D01G483700.1	Wheat	cytosol, mitochondrion	28.72	18.12
TraesCS3D01G457000.1	Wheat	plasma membrane	25.53	17.6
TraesCS3D01G456200.1	Wheat	cytosol	25.18	17.49
TraesCS3D01G457100.1	Wheat	cytosol	25.18	16.9
TraesCS3D01G455100.1	Wheat	cytosol	26.24	16.7
TraesCS3D01G456800.1	Wheat	cytosol	25.89	16.15
TraesCS3D01G456600.1	Wheat	cytosol	21.99	15.66
TraesCS6D01G082100.7	Wheat	cytosol	45.74	15.16
TraesCS6D01G080600.1	Wheat	cytosol	12.41	14.71
TraesCS3D01G456400.1	Wheat	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS3D01G449800.1

EnsemblPlantsGene:TraesCS3D01G449800

PANTHER:PTHR33207

PANTHER:PTHR33207:SF22

MapMan:35.2

Description

No Description!

Coordinates

chr3D:+:557914603..557916941

Molecular Weight (calculated)

31864.4 Da

IEP (calculated)

4.627

GRAVY (calculated)

0.127

Length

282 amino acids

Sequence
(BLAST)

001: MVGCSNGSVF TRRLNFTSCG NFDLDTYELV FAVHSPLCYE GGMAFLPGLH LRMPSLYSWA QLFSKEEGDG SSYFYVMVEA LDTMEPTLNV YMLQNGGNAW
101: HKHLTLVSDL LWRPSSPKGV LIDNKIYVAT YNAIVVLDLT SSILSTIQLP HGVGFGLGAT VLSRADDGSV LYLIHIKELQ LHIWLHNGDN WLLVDTICLS
201: EMCANFPEDE LTTCIRINHV GDYNEYVFLE MDQYALYLDV KCRTLRKVCE MIADEYHLGD IYPFMMSWPP IFPTLSPARD AT

Best Arabidopsis Sequence Match ( AT5G20320.3 )
(BLAST)

0001: MTPQILLHNL QHCFIKMECI SLLIFDECHH AQQQSNHPYA EIMKVFYKSE SLQRPRIFGM TASPVVGKGS FQSENLSKSI NSLENLLNAK VYSVESNVQL
0101: DGFVSSPLVK VYYYRSALSD ASQSTIRYEN MLEDIKQRCL ASLKLLIDTH QTQTLLSMKR LLKRSHDNLI YTLLNLGLWG AIQAAKIQLN SDHNVQDEPV
0201: GKNPKSKICD TYLSMAAEAL SSGVAKDENA SDLLSLAALK EPLFSRKLVQ LIKILSVFRL EPHMKCIIFV NRIVTARTLS CILNNLELLR SWKSDFLVGL
0301: SSGLKSMSRR SMETILKRFQ SKELNLLVAT KVGEEGLDIQ TCCLVIRYDL PETVTSFIQS RGRARMPQSE YAFLVDSGNE KEMDLIENFK VNEDRMNLEI
0401: TYRSSEETCP RLDEELYKVH ETGACISGGS SISLLYKYCS RLPHDEFFQP KPEFQFKPVD EFGGTICRIT LPANAPISEI ESSLLPSTEA AKKDACLKAV
0501: HELHNLGVLN DFLLPDSKDE IEDELSDDEF DFDNIKGEGC SRGDLYEMRV PVLFKQKWDP STSCVNLHSY YIMFVPHPAD RIYKKFGFFM KSPLPVEAET
0601: MDIDLHLAHQ RSVSVKIFPS GVTEFDNDEI RLAELFQEIA LKVLFERGEL IPDFVPLELQ DSSRTSKSTF YLLLPLCLHD GESVISVDWV TIRNCLSSPI
0701: FKTPSVLVED IFPPSGSHLK LANGCWNIDD VKNSLVFTTY SKQFYFVADI CHGRNGFSPV KESSTKSHVE SIYKLYGVEL KHPAQPLLRV KPLCHVRNLL
0801: HNRMQTNLEP QELDEYFIEI PPELSHLKIK GLSKDIGSSL SLLPSIMHRM ENLLVAIELK HVLSASIPEI AEVSGHRVLE ALTTEKCHER LSLERLEVLG
0901: DAFLKFAVSR HLFLHHDSLD EGELTRRRSN VVNNSNLCRL AIKKNLQVYI RDQALDPTQF FAFGHPCRVT CDEVASKEVH SLNRDLGILE SNTGEIRCSK
1001: GHHWLYKKTI ADVVEALVGA FLVDSGFKGA VKFLKWIGVN VDFESLQVQD ACIASRRYLP LTTRNNLETL ENQLDYKFLH KGLLVQAFIH PSYNRHGGGC
1101: YQRLEFLGDA VLDYLMTSYF FTVFPKLKPG QLTDLRSLSV NNEALANVAV SFSLKRFLFC ESIYLHEVIE DYTNFLASSP LASGQSEGPR CPKVLGDLVE
1201: SCLGALFLDC GFNLNHVWTM MLSFLDPVKN LSNLQISPIK ELIELCQSYK WDREISATKK DGAFTVELKV TKNGCCLTVS ATGRNKREGT KKAAQLMITN
1301: LKAHENITTS HPLEDVLKNG IRNEAKLIGY NEDPIDVVDL VGLDVENLNI LETFGGNSER SSSYVIRRGL PQAPSKTEDR LPQKAIIKAG GPSSKTAKSL
1401: LHETCVANCW KPPHFECCEE EGPGHLKSFV YKVILEVEDA PNMTLECYGE ARATKKGAAE HAAQAAIWCL KHSGFLC

Arabidopsis Description

DCL4Dicer-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P84634]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.