Factsheet for TraesCS6D01G027100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G027200.1	Wheat	cytosol	96.19	96.19
TraesCS6D01G027300.1	Wheat	cytosol	88.83	95.89
TraesCS6A01G023900.1	Wheat	cytosol	95.69	95.69
HORVU7Hr1G095850.1	Barley	cytosol	86.55	89.27
HORVU6Hr1G004080.1	Barley	cytosol	54.06	81.3
HORVU6Hr1G004190.1	Barley	extracellular	27.92	74.83
TraesCS6D01G023200.1	Wheat	cytosol	49.49	48.75
TraesCS5D01G363300.1	Wheat	cytosol, nucleus, peroxisome	46.45	46.8
TraesCS6D01G055300.1	Wheat	cytosol	47.72	46.77
TraesCS3D01G110900.2	Wheat	cytosol	48.48	44.52
TraesCS5D01G497500.1	Wheat	cytosol	26.4	44.26
TraesCS6D01G027500.1	Wheat	cytosol	49.24	44.19
TraesCS3D01G449600.1	Wheat	cytosol	44.67	43.89
TraesCS6D01G044000.1	Wheat	cytosol	35.03	42.46
TraesCS5D01G363100.1	Wheat	cytosol	48.48	41.98
TraesCS2D01G057400.2	Wheat	cytosol	45.18	41.69
TraesCS3D01G449700.1	Wheat	cytosol	42.64	41.28
TraesCS1D01G402800.1	Wheat	cytosol, nucleus, peroxisome	36.04	40.92
TraesCS3D01G449500.1	Wheat	cytosol	43.91	40.61
TraesCS6D01G080900.1	Wheat	cytosol	28.43	40.58
TraesCS6D01G069200.1	Wheat	cytosol	31.98	40.38
TraesCS3D01G449800.1	Wheat	cytosol, mitochondrion, plasma membrane	28.68	40.07
TraesCS1D01G065900.1	Wheat	cytosol	46.19	39.65
EES04945	Sorghum	cytosol	41.12	38.57
TraesCS2D01G064400.1	Wheat	cytosol	40.61	35.87
TraesCS6D01G080600.1	Wheat	cytosol	21.57	35.71
TraesCS7D01G484000.1	Wheat	cytosol, peroxisome, plastid	36.8	35.63
Os02t0288925-00	Rice	cytosol	36.55	33.96
TraesCS3D01G457000.1	Wheat	plasma membrane	33.5	32.27
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	33.76	31.97
TraesCS7D01G483700.1	Wheat	cytosol, mitochondrion	36.04	31.77
TraesCS3D01G456400.1	Wheat	cytosol, plastid	12.18	31.37
TraesCS3D01G455200.1	Wheat	cytosol	32.49	31.3
TraesCS3D01G457100.1	Wheat	cytosol	33.25	31.19
TraesCS7D01G484100.1	Wheat	cytosol	21.32	30.88
TraesCS3D01G456200.1	Wheat	cytosol	29.7	28.82
TraesCS3D01G456600.1	Wheat	cytosol	28.93	28.79
TraesCS3D01G455100.1	Wheat	cytosol	31.73	28.22
TraesCS3D01G456800.1	Wheat	cytosol	31.73	27.65
TraesCS6D01G082100.7	Wheat	cytosol	42.89	19.86

Protein Annotations

EnsemblPlants:TraesCS6D01G027100.1	EnsemblPlantsGene:TraesCS6D01G027100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr6D:-:10335374..10337709

Molecular Weight (calculated)

45183.2 Da

IEP (calculated)

8.358

GRAVY (calculated)

-0.080

Length

394 amino acids

Sequence
(BLAST)

001: MAAISKVLED DDLLSEILLR TVFTTTLLNS ALVCTRWLAH ASDRAFLHRF REIHPPRLLG FYINKGQNTP HFIPILPQPR ELTAVIRRAT SSLGTYQRVP
101: SVPTYILGCR NGNVLIRQHD KIGTTFAVHN VVCPERGMDI LPPFPRPQSP YLFDGTAYSR IMSKEEGDAL SYLYVLMHQT TDGKHRVYIY ILKHGIWRMN
201: HSLIIQQPPR PWSVLKSVLS NNKIYVPAGW SNIIVLDLAA SSFSIIELPE GMEYGERNTI LSQVDDVAGV YLIHVKNFQL RIWLHNGYTW LLMDTIYLRE
301: MCADLSMADG NASLLINQAG DNAEFVFLDM GRCTFLLDIK RRTMHKVYEK EDGDKFFCEI HPLMMIWPPV FPALKNDPTR NAMLRLKIKD MDGH

Best Arabidopsis Sequence Match ( AT5G42360.1 )
(BLAST)

001: MMISEKPLGE ESIRQDLEVL TVSRRLVKSV SQKLKKKIHK TEVVEDEEVA RGAVNCLSIS VGCRVADTGE DFEEDLSNKR WSSASEDGKG LMTICGTEEI
101: RLDCFSYGVR ERFWKKNNRR YLADSGQDYR KHVYLPDDIL EMCLMRLPLT SLLNAHLVCK KWQSMANTQR FLQMRREGSF QTPWLFLFAA LKDGCSSGDI
201: HGYDVSQDKW HRIETDLLKG RFMYSVTSIH EEIYIVGGRS MDRNSFKSHR GILVFSPSIK AWRKIASMRH ARSLPIVGAT EVTSEFSTMQ TKQNRQDRRF
301: HLSRVGGESD VYEDPHRLSV RRQNRNSADQ NGTKSHRLIR QKLDRLNRNS SKRFVLIAIG GTGIFDEPLD SGEIYDSATN TWSEMQRLPM GFGVVSCGII
401: CNGIFYAYSE NDKLSGYDIE RGFWITIQTS PIPPRVHEFY PKLVSCNHRL FMLSVSWCDE GDGQIGRRNK AVRKLWELDL VYLTWTEVSV HPDAPMDWNA
501: TYVSDQNILM GVEMFKIFGQ VLSFFTVCDI LTEEASWRHV SRNQRNQKLN LSCMNKTIAL LHL

Arabidopsis Description

F-box/kelch-repeat protein At5g42360 [Source:UniProtKB/Swiss-Prot;Acc:Q9FII1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.