Factsheet for TraesCS6A01G023900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G027100.1	Wheat	cytosol	95.69	95.69
TraesCS6D01G027200.1	Wheat	cytosol	93.65	93.65
TraesCS6A01G023800.1	Wheat	cytosol	90.1	90.56
HORVU7Hr1G095850.1	Barley	cytosol	84.01	86.65
HORVU6Hr1G004080.1	Barley	cytosol	53.3	80.15
HORVU6Hr1G004190.1	Barley	extracellular	27.41	73.47
TraesCS6A01G047800.1	Wheat	cytosol	45.43	44.64
TraesCS1A01G393700.1	Wheat	cytosol	46.45	43.26
TraesCS3A01G109100.1	Wheat	cytosol	46.19	43.13
TraesCS3A01G456500.1	Wheat	cytosol	42.13	42.35
TraesCS6A01G100400.1	Wheat	cytosol	45.18	40.92
TraesCS3A01G456400.1	Wheat	cytosol	24.37	40.85
TraesCS6A01G010800.1	Wheat	cytosol	44.67	40.46
TraesCS2A01G058400.1	Wheat	cytosol	37.56	39.36
TraesCS3A01G428600.1	Wheat	cytosol	34.26	39.36
EES04945	Sorghum	cytosol	40.61	38.1
TraesCS2A01G066000.1	Wheat	cytosol	39.59	35.7
Os02t0288925-00	Rice	cytosol	35.28	32.78
TraesCS3A01G461800.1	Wheat	cytosol, peroxisome, plastid	29.44	31.52
TraesCS3A01G463100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.49	31.3
TraesCS7A01G496900.1	Wheat	cytosol	21.57	29.21
TraesCS3A01G461700.1	Wheat	cytosol	29.95	28.37
TraesCS1A01G415600.1	Wheat	cytosol	26.65	26.85
TraesCS3A01G462700.1	Wheat	cytosol	24.62	23.95
TraesCS6A01G100500.1	Wheat	cytosol	41.62	20.02

Protein Annotations

EnsemblPlants:TraesCS6A01G023900.1	EnsemblPlantsGene:TraesCS6A01G023900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr6A:-:11883959..11886195

Molecular Weight (calculated)

45182.1 Da

IEP (calculated)

8.358

GRAVY (calculated)

-0.070

Length

394 amino acids

Sequence
(BLAST)

001: MAAISKVLED DDLLGEILLR TVFTTTLLNS ALVCTRWLAH ASNRAFLHRF REIHPPRLLG FYINKGQNTP HFIPILPQPR ELTVVICRAT SSLGTYQRVS
101: SVPTYILGCR NGNVLIRQHD KIGTTFAVHN VVCPARGMDI LPPFPRPQSP YLFDGTAYSR IMSKEEDDAL SYLYVLMHQT TDGKHRVYIY ILKHGIWRMN
201: HSLIIQQPPR PWSVLKSVLS NNKIYVPAGW SNIIVLDLAA SSFSIIELPE GMEYGERNTI LSQADDVAGV YLIHVKKFQL RIWLHNGYTW LLMDTIYLRE
301: MFADFSVSDG NASLLINQAG DNAEFVFLDM GRCTFLLDIE RRTMHKVYEK EDSDKFFCEI HPLMMIWPPV FPARKGDPTR NAMLRLKIKD MDGH

Best Arabidopsis Sequence Match ( AT5G42360.1 )
(BLAST)

001: MMISEKPLGE ESIRQDLEVL TVSRRLVKSV SQKLKKKIHK TEVVEDEEVA RGAVNCLSIS VGCRVADTGE DFEEDLSNKR WSSASEDGKG LMTICGTEEI
101: RLDCFSYGVR ERFWKKNNRR YLADSGQDYR KHVYLPDDIL EMCLMRLPLT SLLNAHLVCK KWQSMANTQR FLQMRREGSF QTPWLFLFAA LKDGCSSGDI
201: HGYDVSQDKW HRIETDLLKG RFMYSVTSIH EEIYIVGGRS MDRNSFKSHR GILVFSPSIK AWRKIASMRH ARSLPIVGAT EVTSEFSTMQ TKQNRQDRRF
301: HLSRVGGESD VYEDPHRLSV RRQNRNSADQ NGTKSHRLIR QKLDRLNRNS SKRFVLIAIG GTGIFDEPLD SGEIYDSATN TWSEMQRLPM GFGVVSCGII
401: CNGIFYAYSE NDKLSGYDIE RGFWITIQTS PIPPRVHEFY PKLVSCNHRL FMLSVSWCDE GDGQIGRRNK AVRKLWELDL VYLTWTEVSV HPDAPMDWNA
501: TYVSDQNILM GVEMFKIFGQ VLSFFTVCDI LTEEASWRHV SRNQRNQKLN LSCMNKTIAL LHL

Arabidopsis Description

F-box/kelch-repeat protein At5g42360 [Source:UniProtKB/Swiss-Prot;Acc:Q9FII1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.