Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G496600.2 | Wheat | cytosol | 86.81 | 48.57 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 86.81 | 47.89 |
| TraesCS3A01G456500.1 | Wheat | cytosol | 65.96 | 39.54 |
| TraesCS3A01G428600.1 | Wheat | cytosol | 45.96 | 31.49 |
| TraesCS6A01G047800.1 | Wheat | cytosol | 46.38 | 27.18 |
| TraesCS1A01G393700.1 | Wheat | cytosol | 45.53 | 25.3 |
| TraesCS6A01G100400.1 | Wheat | cytosol | 45.96 | 24.83 |
| TraesCS6A01G023800.1 | Wheat | cytosol | 41.28 | 24.74 |
| TraesCS3A01G109100.1 | Wheat | cytosol | 43.83 | 24.41 |
| TraesCS6A01G023900.1 | Wheat | cytosol | 40.85 | 24.37 |
| TraesCS2A01G058400.1 | Wheat | cytosol | 38.72 | 24.2 |
| TraesCS6A01G010800.1 | Wheat | cytosol | 44.26 | 23.91 |
| TraesCS7A01G496900.1 | Wheat | cytosol | 28.94 | 23.37 |
| TraesCS2A01G066000.1 | Wheat | cytosol | 40.43 | 21.74 |
| EES04945 | Sorghum | cytosol | 38.3 | 21.43 |
| Os02t0288925-00 | Rice | cytosol | 35.32 | 19.58 |
| TraesCS3A01G463100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 28.09 | 16.14 |
| TraesCS3A01G461800.1 | Wheat | cytosol, peroxisome, plastid | 25.11 | 16.03 |
| TraesCS3A01G462700.1 | Wheat | cytosol | 27.23 | 15.8 |
| TraesCS3A01G461700.1 | Wheat | cytosol | 27.66 | 15.62 |
| TraesCS1A01G415600.1 | Wheat | cytosol | 25.53 | 15.35 |
| TraesCS6A01G100500.1 | Wheat | cytosol | 53.19 | 15.26 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G456400.1 | EnsemblPlantsGene:TraesCS3A01G456400 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3A:+:693484604..693485551
Molecular Weight (calculated)
26653.9 Da
IEP (calculated)
4.361
GRAVY (calculated)
-0.065
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFAGLLDNP SSGLSYFFVT VECTRYHEDS KVHVYMLQNG DDAWRKHLTL ASDLLLYPRK SPKGVLVHNK FYLPTDNEIV VLDLVSSSLS TIQLPQGVGF
101: SPIGTTMLSR ADDASGVYLI HIKDLQLSIW LHNGDNWLLV DTICLCEISD NLLDDEPTDD ILINHVGDYN EFLFLELGRC ALYLDVKRRT LRKVYEMTAE
201: EQQLGDIYPL MMSWLPNFPA LMDSPARGDT SESLM
101: SPIGTTMLSR ADDASGVYLI HIKDLQLSIW LHNGDNWLLV DTICLCEISD NLLDDEPTDD ILINHVGDYN EFLFLELGRC ALYLDVKRRT LRKVYEMTAE
201: EQQLGDIYPL MMSWLPNFPA LMDSPARGDT SESLM
001: MASRKLVRDL LITKQPLLQQ LVHQRRVGAR LGLLQGNGFA SHRRFSVFSE FSKKIRGEAD SNPEFQKTVK EFKERAEELQ GVKEDLKVRT KQTTEKLYKQ
101: GQGVWTEAES VAKKVSSSVK DKFSAATEEV KESFKLGKEE SAESASSSGT GTTEGEKQQQ QSGSTEEQDT FFGKFKSSIS SPKLSEAFHK PLDFAKKGLD
201: IVKDELRGNP SKRKHLEYTP PPPFTGERST RTEMVIMPTK QSKWQKKWES LREKMQGYPV FKRLSGMSEP VVNKSQEIAE DVREKWETSD NPIVHKIQDM
301: NERIFEETGS ASTYKEIRRR DPSFSLPDFV SEIQEAIRPV LNAYSKGDAK TLKKYCSKEL IERCTAEHRA FTSQGYFFDH KLLHVSEVDI QETKMMGTTP
401: VIIVRFQTQE IFCVRDQDGK IKEGGQDTIH TVYYDWAMQQ VDAAELGEDA IYPIWRLREM LRAGVQALI
101: GQGVWTEAES VAKKVSSSVK DKFSAATEEV KESFKLGKEE SAESASSSGT GTTEGEKQQQ QSGSTEEQDT FFGKFKSSIS SPKLSEAFHK PLDFAKKGLD
201: IVKDELRGNP SKRKHLEYTP PPPFTGERST RTEMVIMPTK QSKWQKKWES LREKMQGYPV FKRLSGMSEP VVNKSQEIAE DVREKWETSD NPIVHKIQDM
301: NERIFEETGS ASTYKEIRRR DPSFSLPDFV SEIQEAIRPV LNAYSKGDAK TLKKYCSKEL IERCTAEHRA FTSQGYFFDH KLLHVSEVDI QETKMMGTTP
401: VIIVRFQTQE IFCVRDQDGK IKEGGQDTIH TVYYDWAMQQ VDAAELGEDA IYPIWRLREM LRAGVQALI
Arabidopsis Description
TIM44-2Mitochondrial import inner membrane translocase subunit TIM44-2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF06]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.