Factsheet for TraesCS3A01G463100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, peroxisome, plastid, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G457000.1	Wheat	plasma membrane	97.31	97.31
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	93.89	93.89
TraesCS3A01G462700.1	Wheat	cytosol	70.9	71.6
TraesCS3A01G461800.1	Wheat	cytosol, peroxisome, plastid	55.26	61.41
TraesCS3A01G461700.1	Wheat	cytosol	62.1	61.06
EES04961	Sorghum	cytosol, peroxisome, plastid	38.88	40.87
TraesCS6A01G047800.1	Wheat	cytosol	33.74	34.41
TraesCS1A01G415600.1	Wheat	cytosol	32.27	33.76
TraesCS6A01G023800.1	Wheat	cytosol	31.78	33.16
TraesCS3A01G428600.1	Wheat	cytosol	27.63	32.94
TraesCS3A01G456500.1	Wheat	cytosol	31.54	32.91
TraesCS6A01G023900.1	Wheat	cytosol	31.3	32.49
TraesCS1A01G393700.1	Wheat	cytosol	33.5	32.39
TraesCS3A01G109100.1	Wheat	cytosol	31.54	30.57
TraesCS6A01G100400.1	Wheat	cytosol	32.27	30.34
TraesCS6A01G010800.1	Wheat	cytosol	31.54	29.66
TraesCS2A01G058400.1	Wheat	cytosol	26.65	28.99
TraesCS3A01G456400.1	Wheat	cytosol	16.14	28.09
TraesCS2A01G066000.1	Wheat	cytosol	29.58	27.69
TraesCS7A01G496900.1	Wheat	cytosol	18.83	26.46
TraesCS6A01G100500.1	Wheat	cytosol	30.56	15.26

Protein Annotations

EnsemblPlants:TraesCS3A01G463100.1	EnsemblPlantsGene:TraesCS3A01G463100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr3A:+:697673478..697674707

Molecular Weight (calculated)

45292.5 Da

IEP (calculated)

7.072

GRAVY (calculated)

-0.056

Length

409 amino acids

Sequence
(BLAST)

001: MDGDRRTPAA AAAAASAASV LDDDNLLREI LLCVAFPTSL VNAALVCKRW LLHASSPAFL RRFRERNPPR LLGACVGYPG RYRFVPLPRQ PPELAAPIRR
101: ATSCCDAAFA RRCPRIKHCR SGRLIIEVFR DGSFNHPLVV PVLAGESSTV LPPTLLSHAH RNYWERRTQF TEMFLPEDGG RDGITLVNLW KDRQKVYAEV
201: CILRSGRWCV PDMESEIEPP DGTVFLEMLP PVHGKVFMVT NSGHTVGLDL AAGSLFTLEL PAGVRSNYML SCAEDSGIYL VSADGFQLSV WLHRMSGDDN
301: GAGWLLLDTF CVREGQACTP RAEDSWVPPR NVCLDVVAVG DNADFVFLDH PASGTLFYVH LRSRVVEKVC QRGADECGYK RVDAGHVRVS PVMMIWPPIF
401: PAQNVGHEE

Best Arabidopsis Sequence Match ( AT5G42360.1 )
(BLAST)

001: MMISEKPLGE ESIRQDLEVL TVSRRLVKSV SQKLKKKIHK TEVVEDEEVA RGAVNCLSIS VGCRVADTGE DFEEDLSNKR WSSASEDGKG LMTICGTEEI
101: RLDCFSYGVR ERFWKKNNRR YLADSGQDYR KHVYLPDDIL EMCLMRLPLT SLLNAHLVCK KWQSMANTQR FLQMRREGSF QTPWLFLFAA LKDGCSSGDI
201: HGYDVSQDKW HRIETDLLKG RFMYSVTSIH EEIYIVGGRS MDRNSFKSHR GILVFSPSIK AWRKIASMRH ARSLPIVGAT EVTSEFSTMQ TKQNRQDRRF
301: HLSRVGGESD VYEDPHRLSV RRQNRNSADQ NGTKSHRLIR QKLDRLNRNS SKRFVLIAIG GTGIFDEPLD SGEIYDSATN TWSEMQRLPM GFGVVSCGII
401: CNGIFYAYSE NDKLSGYDIE RGFWITIQTS PIPPRVHEFY PKLVSCNHRL FMLSVSWCDE GDGQIGRRNK AVRKLWELDL VYLTWTEVSV HPDAPMDWNA
501: TYVSDQNILM GVEMFKIFGQ VLSFFTVCDI LTEEASWRHV SRNQRNQKLN LSCMNKTIAL LHL

Arabidopsis Description

F-box/kelch-repeat protein At5g42360 [Source:UniProtKB/Swiss-Prot;Acc:Q9FII1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.