Factsheet for TraesCS3A01G461700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G504300.1	Wheat	cytosol	93.27	93.49
TraesCS3D01G455100.1	Wheat	cytosol	93.27	87.58
HORVU3Hr1G099010.2	Barley	cytosol	81.97	81.77
TraesCS3A01G461800.1	Wheat	cytosol, peroxisome, plastid	57.21	64.67
TraesCS3A01G463100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	61.06	62.1
TraesCS3A01G462700.1	Wheat	cytosol	52.4	53.83
EES04961	Sorghum	cytosol, peroxisome, plastid	37.74	40.36
TraesCS1A01G415600.1	Wheat	cytosol	32.69	34.78
TraesCS3A01G428600.1	Wheat	cytosol	27.64	33.53
TraesCS6A01G047800.1	Wheat	cytosol	32.21	33.42
TraesCS3A01G456500.1	Wheat	cytosol	31.01	32.91
TraesCS6A01G100400.1	Wheat	cytosol	33.41	31.95
TraesCS1A01G393700.1	Wheat	cytosol	32.21	31.68
TraesCS6A01G023800.1	Wheat	cytosol	29.33	31.12
TraesCS3A01G109100.1	Wheat	cytosol	31.25	30.81
TraesCS6A01G023900.1	Wheat	cytosol	28.37	29.95
TraesCS6A01G010800.1	Wheat	cytosol	30.05	28.74
TraesCS3A01G456400.1	Wheat	cytosol	15.62	27.66
TraesCS7A01G496900.1	Wheat	cytosol	19.23	27.49
TraesCS2A01G066000.1	Wheat	cytosol	28.37	27.0
TraesCS2A01G058400.1	Wheat	cytosol	24.28	26.86
TraesCS6A01G100500.1	Wheat	cytosol	28.37	14.41

Protein Annotations

EnsemblPlants:TraesCS3A01G461700.1	EnsemblPlantsGene:TraesCS3A01G461700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	PFAM:PF00646	SEG:seg
SUPFAM:SSF81383	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:697388476..697391451

Molecular Weight (calculated)

45423.9 Da

IEP (calculated)

8.375

GRAVY (calculated)

0.074

Length

416 amino acids

Sequence
(BLAST)

001: MDGDGRAPAA AAAASAASVL GDDDLLREIL IRLGFPNFLV RAALVSKGWL HHASDPAFLR RFRERNPPRV LGVCAGYSVR PFKFVPLPQP PELAALSRRA
101: ASSCAHAFAR GGQRMEHCRN GRLIVESLRK GTFKHSVLAP LLSGEPEAAL PPIPPTRRHP QEPTQGAFTQ IFLPEDGGRD GITLVNLWKV QREVRAEVYV
201: LGSGGWGVPT TAMTEIELQY AATFFAKMLP PVHGKVFVVT GFGYTLGLDL ATATFVILQL PAGVRYNYML SSVEGSGIYL VTADRFQLSV WLHRMTGDNH
301: GAGGWLLVDT FSVLEACARL AGDSWVPCEY LNVAAVGDNA DFVFLDHPSS GVIFYVQPSS RVVKMVYQRM ADEHECASVA VRISPVMTIW PPIFPALNIG
401: HDQEGIVRAV RSLDRR

Best Arabidopsis Sequence Match ( AT1G47765.1 )
(BLAST)

001: MEQQKQKKRK VVSKSKRTQS KSASSLPLDL TSEILLRLPE KSIARFRCVS KLWLSITTDP YFINLFETRS PRPSLLVCFI ENDKLFVSSI PQHLHSLQNS
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ

Arabidopsis Description

Putative F-box protein At1g47765 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.